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Related entries of code: 6dzx
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
6ojaRCSB PDB    PDBbind248aa, >6OJA_1|Chains... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID6dzx
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameLipoprotein
Ligand NameMED
EC.Number E.C.-.-.-.-
Resolution 1.68(Å)
Affinity (Kd/Ki/IC50)Kd=3.5uM
Release Year2019
Protein/NA SequenceCheck fasta file
Primary Reference (2019) Protein Sci. Vol. 28: pp. 1750-1757
Ligand Properties
Formula C5H12NO2S
Molecular Weight 150.219
Exact Mass 150.059
No. of atoms 21
No. of bonds 20
Polar Surface Area 90.24
LOGP Value -1.47      (Computed with XLOGP3)
-0.57      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 2
No. of Rotatable Bonds: 3
No. of Nitrogen and Oxygen Atoms: 3
No. of Rings: 0
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): C6S9R8  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
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