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Related entries of code: 6f5w
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
5mxfRCSB PDB    PDBbind369aa, >5MXF_1|Chain... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID6f5w
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NamePhotorhabdus asymbiotica lectin
Ligand NameKG1
EC.Number E.C.-.-.-.-
Resolution 1.91(Å)
Affinity (Kd/Ki/IC50)Kd=149uM
Release Year2018
Protein/NA SequenceCheck fasta file
Primary Reference (2018) Chemistry Vol. 24: pp. 4055-4068
Ligand Properties
Formula C9H14O5
Molecular Weight 202.204
Exact Mass 202.084
No. of atoms 28
No. of bonds 28
Polar Surface Area 79.15
LOGP Value -1.44      (Computed with XLOGP3)
-1.54      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 3
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 6
No. of Nitrogen and Oxygen Atoms: 5
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): C7BLE4  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
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