Browse entries in the PDBbind-CN Database

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Related entries of code: 6gvz
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
No similar entries are found!
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
6gw1RCSB PDB    PDBbindCHO
6gw4RCSB PDB    PDBbindCHO
Entry Information
PDB ID6gvz
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein Namenorovirus GII.1 domain
Ligand NameCHO
EC.Number E.C.-.-.-.-
Resolution 1.54(Å)
Affinity (Kd/Ki/IC50)Kd=0.4uM
Release Year2018
Protein/NA SequenceCheck fasta file
Primary Reference (2019) J. Virol. Vol. 93: pp. -
Ligand Properties
Formula C26H43NO5
Molecular Weight 449.623
Exact Mass 449.314
No. of atoms 75
No. of bonds 78
Polar Surface Area 106.86
LOGP Value 5.15      (Computed with XLOGP3)
3.99      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 3
No. of Hydrogen Bond Acceptors: 5
No. of Rotatable Bonds: 8
No. of Nitrogen and Oxygen Atoms: 6
No. of Rings: 4
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): J9XXB7  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
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