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Related entries of code: 6haz
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
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Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID6haz
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameVHL
Ligand NameFX5
EC.Number E.C.-.-.-.-
Resolution 1.31(Å)
Affinity (Kd/Ki/IC50)Kd=100nM
Release Year2019
Protein/NA SequenceCheck fasta file
Primary Reference (2019) Nat.Chem.Biol. Vol. 15: pp. 672-680
Ligand Properties
Formula C14H18N5O
Molecular Weight 272.326
Exact Mass 272.151
No. of atoms 38
No. of bonds 40
Polar Surface Area 91.88
LOGP Value 0.27      (Computed with XLOGP3)
2.03      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 3
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 3
No. of Nitrogen and Oxygen Atoms: 6
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P51531  
Entrez Gene IDNCBI Entrez Gene ID: 6595  
ASDInformation of known allosteric effects of PDB entries
 
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