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Related entries of code: 6i0k
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
6i0rRCSB PDB    PDBbind305aa, >6I0R_1|Chain... at 100%
6i0pRCSB PDB    PDBbind305aa, >6I0P_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID6i0k
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameNadA
Ligand NameGZ8
EC.Number E.C.-.-.-.-
Resolution 1.64(Å)
Affinity (Kd/Ki/IC50)IC50=13uM
Release Year2019
Protein/NA SequenceCheck fasta file
Primary Reference (2019) Chem.Commun.(Camb.) Vol. 55: pp. 3725-3728
Ligand Properties
Formula C8H6O4S
Molecular Weight 198.196
Exact Mass 197.999
No. of atoms 19
No. of bonds 19
Polar Surface Area 113.4
LOGP Value 3.29      (Computed with XLOGP3)
1.37      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 0
No. of Hydrogen Bond Acceptors: 4
No. of Rotatable Bonds: 1
No. of Nitrogen and Oxygen Atoms: 4
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q9X1X7  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
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