Browse entries in the PDBbind-CN Database

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Related entries of code: 6j10
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
3v6zRCSB PDB    PDBbind159aa, >3V6Z_3|Chains... *
4g93RCSB PDB    PDBbind150aa, >4G93_1|Chains... at 98%
5t2pRCSB PDB    PDBbind155aa, >5T2P_1|Chains... at 93%
5wreRCSB PDB    PDBbind155aa, >5WRE_1|Chains... at 93%
6cwtRCSB PDB    PDBbind149aa, >6CWT_3|Chains... at 99%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID6j10
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameHBV Capsid protein
Ligand NameB4O
EC.Number E.C.-.-.-.-
Resolution 2.3(Å)
Affinity (Kd/Ki/IC50)IC50=445nM
Release Year2019
Protein/NA SequenceCheck fasta file
Primary Reference (2019) Nat Commun Vol. 10: pp. 2184-2184
Ligand Properties
Formula C12H17NO2
Molecular Weight 207.269
Exact Mass 207.126
No. of atoms 32
No. of bonds 33
Polar Surface Area 42.23
LOGP Value 1.99      (Computed with XLOGP3)
2.44      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 2
No. of Rotatable Bonds: 2
No. of Nitrogen and Oxygen Atoms: 3
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P03147  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
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