Browse entries in the PDBbind-CN Database

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Related entries of code: 6j9y
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
6jbeRCSB PDB    PDBbind408aa, >6JBE_1|Chain... at 99%
6jbbRCSB PDB    PDBbind408aa, >6JBB_1|Chain... at 99%
6jb4RCSB PDB    PDBbind408aa, >6JB4_1|Chain... at 99%
6jb0RCSB PDB    PDBbind408aa, >6JB0_1|Chain... at 99%
6jaqRCSB PDB    PDBbind408aa, >6JAQ_1|Chain... at 99%
6japRCSB PDB    PDBbind408aa, >6JAP_1|Chain... at 99%
6jaoRCSB PDB    PDBbind408aa, >6JAO_1|Chain... at 99%
6janRCSB PDB    PDBbind408aa, >6JAN_1|Chain... at 99%
6jamRCSB PDB    PDBbind408aa, >6JAM_1|Chain... at 99%
6jagRCSB PDB    PDBbind408aa, >6JAG_1|Chain... at 100%
6jadRCSB PDB    PDBbind408aa, >6JAD_1|Chain... at 100%
6j9wRCSB PDB    PDBbind408aa, >6J9W_1|Chain... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1n3wRCSB PDB    PDBbindMAL
1r6zRCSB PDB    PDBbindMAL
1urgRCSB PDB    PDBbindMAL
1wdqRCSB PDB    PDBbindMAL
1wdrRCSB PDB    PDBbindMAL
2d2vRCSB PDB    PDBbindMAL
2f5tRCSB PDB    PDBbindMAL
6jb4RCSB PDB    PDBbindMAL
6janRCSB PDB    PDBbindMAL

Entry Information
PDB ID6j9y
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein Namealpha-glycoside-binding protein
Ligand NameMAL
EC.Number E.C.-.-.-.-
Resolution 1.63(Å)
Affinity (Kd/Ki/IC50)Kd=8.54uM
Release Year2019
Protein/NA SequenceCheck fasta file
Primary Reference (2019) Febs J. Vol. : pp. -
Ligand Properties
Formula C12H22O11
Molecular Weight 342.296
Exact Mass 342.116
No. of atoms 45
No. of bonds 46
Polar Surface Area 189.53
LOGP Value -4.73      (Computed with XLOGP3)
-5.40      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 8
No. of Hydrogen Bond Acceptors: 8
No. of Rotatable Bonds: 12
No. of Nitrogen and Oxygen Atoms: 11
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q5SLD7  
Entrez Gene IDNCBI Entrez Gene ID: 3169332  
ASDInformation of known allosteric effects of PDB entries

 
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