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Related entries of code: 6ma5
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
6ma1RCSB PDB    PDBbind16aa, >6MA1_2|Chain... *
6ma2RCSB PDB    PDBbind16aa, >6MA2_2|Chain... at 100%
6ma3RCSB PDB    PDBbind16aa, >6MA3_2|Chain... at 100%
6ma4RCSB PDB    PDBbind16aa, >6MA4_2|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID6ma5
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameO-linked Nacetylglucosamine transferase
Ligand NameJ9V
EC.Number E.C.-.-.-.-
Resolution 2(Å)
Affinity (Kd/Ki/IC50)Kd=0.008uM
Release Year2018
Protein/NA SequenceCheck fasta file
Primary Reference (2018) J. Am. Chem. Soc. Vol. 140: pp. 13542-13545
Ligand Properties
Formula C25H23N3O7S2
Molecular Weight 541.596
Exact Mass 541.098
No. of atoms 60
No. of bonds 63
Polar Surface Area 182.49
LOGP Value 3.18      (Computed with XLOGP3)
4.20      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 6
No. of Rotatable Bonds: 10
No. of Nitrogen and Oxygen Atoms: 10
No. of Rings: 4
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P51610  O15294  
Entrez Gene IDNCBI Entrez Gene ID: 3054  8473  
ASDInformation of known allosteric effects of PDB entries

 
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