Browse entries in the PDBbind-CN Database

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Related entries of code: 6mxd
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
6aqoRCSB PDB    PDBbind272aa, >6AQO_1|Chains... *
6ar9RCSB PDB    PDBbind272aa, >6AR9_2|Chain... at 100%
6mxcRCSB PDB    PDBbind272aa, >6MXC_1|Chains... at 100%
6mxbRCSB PDB    PDBbind272aa, >6MXB_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1g9sRCSB PDB    PDBbindIMP
1p17RCSB PDB    PDBbindIMP
1p19RCSB PDB    PDBbindIMP
1qk4RCSB PDB    PDBbindIMP
1yfzRCSB PDB    PDBbindIMP
1z6dRCSB PDB    PDBbindIMP
5k1fRCSB PDB    PDBbindIMP
5kamRCSB PDB    PDBbindIMP
5km0RCSB PDB    PDBbindIMP
6hgrRCSB PDB    PDBbindIMP

Entry Information
PDB ID6mxd
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameTbrHGXPRT
Ligand NameIMP
EC.Number E.C.-.-.-.-
Resolution 2.96(Å)
Affinity (Kd/Ki/IC50)Ki=5.83uM
Release Year2019
Protein/NA SequenceCheck fasta file
Primary Reference (2019) Febs J. Vol. 286: pp. 4721-4736
Ligand Properties
Formula C10H14N4O8P
Molecular Weight 349.214
Exact Mass 349.055
No. of atoms 37
No. of bonds 39
Polar Surface Area 196.77
LOGP Value -3.96      (Computed with XLOGP3)
-2.59      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 3
No. of Hydrogen Bond Acceptors: 7
No. of Rotatable Bonds: 5
No. of Nitrogen and Oxygen Atoms: 12
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q38CA1  
Entrez Gene IDNCBI Entrez Gene ID: 3662981  
ASDInformation of known allosteric effects of PDB entries

 
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