Browse entries in the PDBbind-CN Database

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Related entries of code: 6n8y
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1uymRCSB PDB    PDBbind220aa, >1UYM_1|Chain... at 100%
3nmqRCSB PDB    PDBbind239aa, >3NMQ_1|Chain... at 92%
5uc4RCSB PDB    PDBbind220aa, >5UC4_1|Chains... at 99%
5uchRCSB PDB    PDBbind220aa, >5UCH_1|Chains... at 99%
5uciRCSB PDB    PDBbind220aa, >5UCI_1|Chains... at 99%
5ucjRCSB PDB    PDBbind220aa, >5UCJ_1|Chains... at 99%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
6olxRCSB PDB    PDBbindKFY
6n8xRCSB PDB    PDBbindKFY
Entry Information
PDB ID6n8y
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameHsp90-beta
Ligand NameKFY
EC.Number E.C.-.-.-.-
Resolution 1.55(Å)
Affinity (Kd/Ki/IC50)Kd=4.2uM
Release Year2019
Protein/NA SequenceCheck fasta file
Primary Reference (2019) Proteins Vol. 87: pp. 869-877
Ligand Properties
Formula C19H25N5O3
Molecular Weight 371.434
Exact Mass 371.196
No. of atoms 52
No. of bonds 54
Polar Surface Area 97.31
LOGP Value 2.76      (Computed with XLOGP3)
3.41      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 8
No. of Nitrogen and Oxygen Atoms: 8
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P08238  
Entrez Gene IDNCBI Entrez Gene ID: 3326  
ASDInformation of known allosteric effects of PDB entries
 
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