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Related entries of code: 6nxz
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
6ny0RCSB PDB    PDBbind61aa, >6NY0_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID6nxz
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein Nametype II dihydrofolate reductase
Ligand NameD49
EC.Number E.C.-.-.-.-
Resolution 1.75(Å)
Affinity (Kd/Ki/IC50)Ki=3.5uM
Release Year2019
Protein/NA SequenceCheck fasta file
Primary Reference (2019) Acs Omega Vol. 4: pp. 10056-10069
Ligand Properties
Formula C5H12O3
Molecular Weight 120.147
Exact Mass 120.079
No. of atoms 20
No. of bonds 19
Polar Surface Area 49.69
LOGP Value -0.87      (Computed with XLOGP3)
-0.62      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 2
No. of Rotatable Bonds: 6
No. of Nitrogen and Oxygen Atoms: 3
No. of Rings: 0
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P00383  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
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