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Related entries of code: 6o48
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1a94RCSB PDB    PDBbind99aa, >1A94_1|Chains... at 90%
1aidRCSB PDB    PDBbind99aa, >1AID_1|Chains... at 91%
1b6jRCSB PDB    PDBbind99aa, >1B6J_1|Chains... at 93%
1b6kRCSB PDB    PDBbind99aa, >1B6K_1|Chains... at 95%
1b6lRCSB PDB    PDBbind99aa, >1B6L_1|Chains... at 95%
1b6mRCSB PDB    PDBbind99aa, >1B6M_1|Chains... at 95%
1b6pRCSB PDB    PDBbind99aa, >1B6P_1|Chains... at 95%
1cpiRCSB PDB    PDBbind99aa, >1CPI_1|Chains... at 93%
1d4kRCSB PDB    PDBbind99aa, >1D4K_1|Chains... at 95%
1d4lRCSB PDB    PDBbind99aa, >1D4L_1|Chains... at 95%
1kzkRCSB PDB    PDBbind99aa, >1KZK_1|Chains... at 92%
1mtrRCSB PDB    PDBbind99aa, >1MTR_1|Chains... at 95%
1sdtRCSB PDB    PDBbind99aa, >1SDT_1|Chains... at 91%
1sduRCSB PDB    PDBbind99aa, >1SDU_1|Chains... at 90%
1sdvRCSB PDB    PDBbind99aa, >1SDV_1|Chains... at 90%
1z1hRCSB PDB    PDBbind99aa, >1Z1H_1|Chains... at 95%
1z1rRCSB PDB    PDBbind99aa, >1Z1R_1|Chains... at 95%
2aocRCSB PDB    PDBbind99aa, >2AOC_1|Chains... at 90%
2aodRCSB PDB    PDBbind99aa, >2AOD_1|Chains... at 91%
2aoeRCSB PDB    PDBbind99aa, >2AOE_1|Chains... at 90%
2aogRCSB PDB    PDBbind99aa, >2AOG_1|Chains... at 90%
2aohRCSB PDB    PDBbind99aa, >2AOH_1|Chains... at 90%
2avmRCSB PDB    PDBbind99aa, >2AVM_1|Chains... at 90%
2avoRCSB PDB    PDBbind99aa, >2AVO_1|Chains... at 90%
2avqRCSB PDB    PDBbind99aa, >2AVQ_1|Chains... at 90%
2avsRCSB PDB    PDBbind99aa, >2AVS_1|Chains... at 90%
2avvRCSB PDB    PDBbind99aa, >2AVV_1|Chains... at 90%
2f3kRCSB PDB    PDBbind99aa, >2F3K_1|Chains... at 91%
2f80RCSB PDB    PDBbind99aa, >2F80_1|Chains... at 90%
2f81RCSB PDB    PDBbind99aa, >2F81_1|Chains... at 90%
2f8gRCSB PDB    PDBbind99aa, >2F8G_1|Chains... at 90%
2fguRCSB PDB    PDBbind99aa, >2FGU_1|Chains... at 91%
2fgvRCSB PDB    PDBbind99aa, >2FGV_1|Chains... at 91%
2hb3RCSB PDB    PDBbind99aa, >2HB3_1|Chains... at 91%
2hs1RCSB PDB    PDBbind99aa, >2HS1_1|Chains... at 90%
2hs2RCSB PDB    PDBbind99aa, >2HS2_1|Chains... at 92%
2i0aRCSB PDB    PDBbind99aa, >2I0A_1|Chains... at 91%
2i0dRCSB PDB    PDBbind99aa, >2I0D_1|Chains... at 91%
2idwRCSB PDB    PDBbind99aa, >2IDW_1|Chains... at 90%
2ienRCSB PDB    PDBbind99aa, >2IEN_1|Chains... at 91%
2ieoRCSB PDB    PDBbind99aa, >2IEO_1|Chains... at 90%
2nmyRCSB PDB    PDBbind99aa, >2NMY_1|Chains... at 90%
2nmzRCSB PDB    PDBbind99aa, >2NMZ_1|Chains... at 90%
2nnkRCSB PDB    PDBbind99aa, >2NNK_1|Chains... at 90%
2nnpRCSB PDB    PDBbind99aa, >2NNP_1|Chains... at 90%
2nxdRCSB PDB    PDBbind99aa, >2NXD_1|Chains... at 90%
2nxlRCSB PDB    PDBbind99aa, >2NXL_1|Chains... at 90%
2nxmRCSB PDB    PDBbind99aa, >2NXM_1|Chains... at 90%
2psuRCSB PDB    PDBbind99aa, >2PSU_1|Chains... at 91%
2psvRCSB PDB    PDBbind99aa, >2PSV_1|Chains... at 91%
2q54RCSB PDB    PDBbind99aa, >2Q54_1|Chains... at 91%
2q55RCSB PDB    PDBbind99aa, >2Q55_1|Chains... at 91%
2q5kRCSB PDB    PDBbind99aa, >2Q5K_1|Chains... at 91%
2qciRCSB PDB    PDBbind99aa, >2QCI_1|Chains... at 90%
2qd6RCSB PDB    PDBbind99aa, >2QD6_1|Chains... at 90%
2qd7RCSB PDB    PDBbind99aa, >2QD7_1|Chains... at 90%
2qd8RCSB PDB    PDBbind99aa, >2QD8_1|Chains... at 90%
2qhyRCSB PDB    PDBbind99aa, >2QHY_1|Chains... at 91%
2qhzRCSB PDB    PDBbind99aa, >2QHZ_1|Chains... at 91%
2qi0RCSB PDB    PDBbind99aa, >2QI0_1|Chains... at 91%
2qi1RCSB PDB    PDBbind99aa, >2QI1_1|Chains... at 91%
2qi3RCSB PDB    PDBbind99aa, >2QI3_1|Chains... at 91%
2qi4RCSB PDB    PDBbind99aa, >2QI4_1|Chains... at 91%
2qi5RCSB PDB    PDBbind99aa, >2QI5_1|Chains... at 91%
2qi6RCSB PDB    PDBbind99aa, >2QI6_1|Chains... at 91%
2qi7RCSB PDB    PDBbind99aa, >2QI7_1|Chains... at 91%
2z4oRCSB PDB    PDBbind99aa, >2Z4O_1|Chains... at 91%
3a2oRCSB PDB    PDBbind99aa, >3A2O_1|Chains... at 91%
3aidRCSB PDB    PDBbind99aa, >3AID_1|Chains... at 92%
3bvaRCSB PDB    PDBbind99aa, >3BVA_1|Chains... at 90%
3bvbRCSB PDB    PDBbind99aa, >3BVB_1|Chains... at 90%
3bxsRCSB PDB    PDBbind99aa, >3BXS_1|Chains... at 95%
3cywRCSB PDB    PDBbind99aa, >3CYW_1|Chains... at 90%
3cyxRCSB PDB    PDBbind99aa, >3CYX_1|Chains... at 90%
3d1xRCSB PDB    PDBbind99aa, >3D1X_1|Chains... at 90%
3d1yRCSB PDB    PDBbind99aa, >3D1Y_1|Chains... at 90%
3d1zRCSB PDB    PDBbind99aa, >3D1Z_1|Chains... at 90%
3d20RCSB PDB    PDBbind99aa, >3D20_1|Chains... at 90%
3dcrRCSB PDB    PDBbind99aa, >3DCR_1|Chains... at 98%
3djkRCSB PDB    PDBbind99aa, >3DJK_1|Chains... at 91%
3dk1RCSB PDB    PDBbind99aa, >3DK1_1|Chains... at 91%
3ekvRCSB PDB    PDBbind99aa, >3EKV_1|Chains... at 91%
3ekxRCSB PDB    PDBbind99aa, >3EKX_1|Chains... at 91%
3ekyRCSB PDB    PDBbind99aa, >3EKY_1|Chains... at 91%
3el1RCSB PDB    PDBbind99aa, >3EL1_1|Chains... at 92%
3el9RCSB PDB    PDBbind99aa, >3EL9_1|Chains... at 90%
3fsmRCSB PDB    PDBbind203aa, >3FSM_1|Chain... *
3gi4RCSB PDB    PDBbind99aa, >3GI4_1|Chains... at 91%
3gi5RCSB PDB    PDBbind99aa, >3GI5_1|Chains... at 91%
3gi6RCSB PDB    PDBbind99aa, >3GI6_1|Chains... at 91%
3h5bRCSB PDB    PDBbind99aa, >3H5B_1|Chains... at 91%
3hauRCSB PDB    PDBbind99aa, >3HAU_1|Chains... at 98%
3hawRCSB PDB    PDBbind99aa, >3HAW_1|Chains... at 100%
3hboRCSB PDB    PDBbind99aa, >3HBO_1|Chains... at 100%
3hdkRCSB PDB    PDBbind99aa, >3HDK_1|Chains... at 100%
3hloRCSB PDB    PDBbind203aa, >3HLO_1|Chain... at 99%
3i6oRCSB PDB    PDBbind99aa, >3I6O_1|Chains... at 91%
3i7eRCSB PDB    PDBbind99aa, >3I7E_1|Chains... at 92%
3iawRCSB PDB    PDBbind203aa, >3IAW_1|Chain... at 99%
3ka2RCSB PDB    PDBbind203aa, >3KA2_1|Chain... at 99%
3lzvRCSB PDB    PDBbind99aa, >3LZV_1|Chains... at 90%
3mxdRCSB PDB    PDBbind99aa, >3MXD_1|Chains... at 91%
3mxeRCSB PDB    PDBbind99aa, >3MXE_1|Chains... at 91%
3nu3RCSB PDB    PDBbind99aa, >3NU3_1|Chains... at 91%
3nu4RCSB PDB    PDBbind99aa, >3NU4_1|Chains... at 90%
3nu5RCSB PDB    PDBbind99aa, >3NU5_1|Chains... at 90%
3nu6RCSB PDB    PDBbind99aa, >3NU6_1|Chains... at 90%
3nu9RCSB PDB    PDBbind99aa, >3NU9_1|Chains... at 90%
3nujRCSB PDB    PDBbind99aa, >3NUJ_1|Chains... at 90%
3nuoRCSB PDB    PDBbind99aa, >3NUO_1|Chains... at 90%
3o99RCSB PDB    PDBbind99aa, >3O99_1|Chains... at 91%
3o9aRCSB PDB    PDBbind99aa, >3O9A_1|Chains... at 91%
3o9bRCSB PDB    PDBbind99aa, >3O9B_1|Chains... at 91%
3o9cRCSB PDB    PDBbind99aa, >3O9C_1|Chains... at 91%
3o9dRCSB PDB    PDBbind99aa, >3O9D_1|Chains... at 91%
3o9eRCSB PDB    PDBbind99aa, >3O9E_1|Chains... at 91%
3o9fRCSB PDB    PDBbind99aa, >3O9F_1|Chains... at 91%
3o9gRCSB PDB    PDBbind99aa, >3O9G_1|Chains... at 91%
3o9hRCSB PDB    PDBbind99aa, >3O9H_1|Chains... at 91%
3o9iRCSB PDB    PDBbind99aa, >3O9I_1|Chains... at 91%
3ok9RCSB PDB    PDBbind99aa, >3OK9_1|Chains... at 91%
3oxcRCSB PDB    PDBbind99aa, >3OXC_1|Chains... at 91%
3pwmRCSB PDB    PDBbind99aa, >3PWM_1|Chains... at 90%
3qaaRCSB PDB    PDBbind99aa, >3QAA_1|Chains... at 91%
3st5RCSB PDB    PDBbind99aa, >3ST5_1|Chains... at 91%
3vf5RCSB PDB    PDBbind99aa, >3VF5_1|Chains... at 90%
3vf7RCSB PDB    PDBbind99aa, >3VF7_1|Chains... at 90%
3vfaRCSB PDB    PDBbind99aa, >3VFA_1|Chains... at 90%
3vfbRCSB PDB    PDBbind99aa, >3VFB_1|Chains... at 90%
4dfgRCSB PDB    PDBbind99aa, >4DFG_1|Chains... at 91%
4djoRCSB PDB    PDBbind99aa, >4DJO_1|Chains... at 91%
4djpRCSB PDB    PDBbind99aa, >4DJP_1|Chains... at 91%
4djqRCSB PDB    PDBbind99aa, >4DJQ_1|Chains... at 91%
4djrRCSB PDB    PDBbind99aa, >4DJR_1|Chains... at 91%
4ej8RCSB PDB    PDBbind99aa, >4EJ8_1|Chains... at 92%
4ejlRCSB PDB    PDBbind99aa, >4EJL_1|Chains... at 92%
4ep2RCSB PDB    PDBbind203aa, >4EP2_1|Chain... at 90%
4hdbRCSB PDB    PDBbind99aa, >4HDB_1|Chains... at 90%
4hdfRCSB PDB    PDBbind99aa, >4HDF_1|Chains... at 90%
4hdpRCSB PDB    PDBbind99aa, >4HDP_1|Chains... at 90%
4he9RCSB PDB    PDBbind99aa, >4HE9_1|Chains... at 90%
4hegRCSB PDB    PDBbind99aa, >4HEG_1|Chains... at 90%
4kb9RCSB PDB    PDBbind99aa, >4KB9_1|Chains... at 91%
4q1wRCSB PDB    PDBbind99aa, >4Q1W_1|Chains... at 90%
4q1xRCSB PDB    PDBbind99aa, >4Q1X_1|Chains... at 90%
4q1yRCSB PDB    PDBbind99aa, >4Q1Y_1|Chains... at 90%
4u8wRCSB PDB    PDBbind99aa, >4U8W_1|Chains... at 91%
4zipRCSB PDB    PDBbind99aa, >4ZIP_1|Chains... at 91%
4zlsRCSB PDB    PDBbind99aa, >4ZLS_1|Chains... at 91%
5bryRCSB PDB    PDBbind99aa, >5BRY_1|Chains... at 91%
5bs4RCSB PDB    PDBbind99aa, >5BS4_1|Chains... at 91%
5dguRCSB PDB    PDBbind99aa, >5DGU_1|Chains... at 91%
5dgwRCSB PDB    PDBbind99aa, >5DGW_1|Chains... at 91%
5jfpRCSB PDB    PDBbind99aa, >5JFP_1|Chains... at 91%
5jfuRCSB PDB    PDBbind99aa, >5JFU_1|Chains... at 91%
5jg1RCSB PDB    PDBbind99aa, >5JG1_1|Chains... at 91%
5ultRCSB PDB    PDBbind99aa, >5ULT_1|Chains... at 91%
5uovRCSB PDB    PDBbind99aa, >5UOV_1|Chains... at 91%
5upzRCSB PDB    PDBbind99aa, >5UPZ_1|Chains... at 91%
5wloRCSB PDB    PDBbind99aa, >5WLO_1|Chains... at 91%
6b4nRCSB PDB    PDBbind99aa, >6B4N_1|Chains... at 91%
6c8xRCSB PDB    PDBbind99aa, >6C8X_1|Chains... at 91%
6cdjRCSB PDB    PDBbind99aa, >6CDJ_1|Chains... at 91%
6cdlRCSB PDB    PDBbind99aa, >6CDL_1|Chains... at 91%
6difRCSB PDB    PDBbind99aa, >6DIF_1|Chains... at 91%
6dilRCSB PDB    PDBbind99aa, >6DIL_1|Chains... at 90%
6dj1RCSB PDB    PDBbind99aa, >6DJ1_1|Chains... at 91%
6dj2RCSB PDB    PDBbind99aa, >6DJ2_1|Chains... at 90%
6dj5RCSB PDB    PDBbind99aa, >6DJ5_1|Chains... at 90%
6dj7RCSB PDB    PDBbind99aa, >6DJ7_1|Chains... at 90%
6e7jRCSB PDB    PDBbind99aa, >6E7J_1|Chains... at 91%
6e9aRCSB PDB    PDBbind99aa, >6E9A_1|Chains... at 91%
7hvpRCSB PDB    PDBbind99aa, >7HVP_1|Chains... at 93%
8hvpRCSB PDB    PDBbind99aa, >8HVP_1|Chains... at 93%
6ixdRCSB PDB    PDBbind99aa, >6IXD_1|Chains... at 91%
6u7oRCSB PDB    PDBbind99aa, >6U7O_1|Chains... at 91%
6u7pRCSB PDB    PDBbind99aa, >6U7P_1|Chains... at 91%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1a94RCSB PDB    PDBbind0Q4
1baiRCSB PDB    PDBbind0Q4
2aoeRCSB PDB    PDBbind0Q4
6o5xRCSB PDB    PDBbind0Q4
Entry Information
PDB ID6o48
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameHIV-1 protease
Ligand Name0Q4
EC.Number E.C.-.-.-.-
Resolution 1.46(Å)
Affinity (Kd/Ki/IC50)Ki=75nM
Release Year2019
Protein/NA SequenceCheck fasta file
Primary Reference (2019) Acs Omega Vol. 4: pp. 8707-8719
Ligand Properties
Formula C40H72N11O8
Molecular Weight 835.069
Exact Mass 834.557
No. of atoms 131
No. of bonds 131
Polar Surface Area 336.15
LOGP Value 2.23      (Computed with XLOGP3)
-0.35      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 8
No. of Hydrogen Bond Acceptors: 8
No. of Rotatable Bonds: 33
No. of Nitrogen and Oxygen Atoms: 19
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P03366  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
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