Browse entries in the PDBbind-CN Database

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Related entries of code: 6pia
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
6pidRCSB PDB    PDBbind348aa, >6PID_1|Chains... at 100%
6picRCSB PDB    PDBbind348aa, >6PIC_1|Chains... at 100%
6pi1RCSB PDB    PDBbind348aa, >6PI1_1|Chains... at 100%
6phzRCSB PDB    PDBbind348aa, >6PHZ_1|Chains... at 100%
6phtRCSB PDB    PDBbind348aa, >6PHT_1|Chains... at 100%
6phrRCSB PDB    PDBbind348aa, >6PHR_1|Chains... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
4zuoRCSB PDB    PDBbindXS6
6uhvRCSB PDB    PDBbindXS6

Entry Information
PDB ID6pia
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameMarinobacter subterrani acetylpolyamine amidohydrolase (msAPAH)
Ligand NameXS6
EC.Number E.C.-.-.-.-
Resolution 1.75(Å)
Affinity (Kd/Ki/IC50)Kd=11.0uM
Release Year2019
Protein/NA SequenceCheck fasta file
Primary Reference (2019) Biochemistry Vol. 58: pp. 3755-3766
Ligand Properties
Formula C9H23N3O2
Molecular Weight 205.298
Exact Mass 205.179
No. of atoms 37
No. of bonds 36
Polar Surface Area 93.58
LOGP Value -0.96      (Computed with XLOGP3)
-1.36      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 4
No. of Hydrogen Bond Acceptors: 2
No. of Rotatable Bonds: 11
No. of Nitrogen and Oxygen Atoms: 5
No. of Rings: 0
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): A0A0J7JFD7  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
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