Browse entries in the PDBbind-CN Database

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Related entries of code: 6prf
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
4ye3RCSB PDB    PDBbind99aa, >4YE3_1|Chains... *
4yhqRCSB PDB    PDBbind99aa, >4YHQ_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
5tysRCSB PDB    PDBbind7OA

Entry Information
PDB ID6prf
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameHIV-1 Protease multiple drug resistant clinical isolate mutant PR20
Ligand Name7OA
EC.Number E.C.-.-.-.-
Resolution 1.21(Å)
Affinity (Kd/Ki/IC50)Ki=2.5nM
Release Year2019
Protein/NA SequenceCheck fasta file
Primary Reference (2019) Biochem.Biophys.Res.Commun. Vol. 519: pp. 61-66
Ligand Properties
Formula C33H40F2N4O7S2
Molecular Weight 706.820
Exact Mass 706.231
No. of atoms 88
No. of bonds 94
Polar Surface Area 175.94
LOGP Value 5.44      (Computed with XLOGP3)
6.05      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 3
No. of Hydrogen Bond Acceptors: 5
No. of Rotatable Bonds: 16
No. of Nitrogen and Oxygen Atoms: 11
No. of Rings: 7
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P03366  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
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