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Related entries of code: 6pt3
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
4n6hRCSB PDB    PDBbind414aa, >4N6H_1|Chain... at 96%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID6pt3
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameDelta opioid receptor
Ligand NameOWY
EC.Number E.C.-.-.-.-
Resolution 3.3(Å)
Affinity (Kd/Ki/IC50)Ki=0.39nM
Release Year2019
Protein/NA SequenceCheck fasta file
Primary Reference (2019) Sci Adv Vol. 5: pp. eaax9115-eaax9115
Ligand Properties
Formula C31H41N3O2
Molecular Weight 487.676
Exact Mass 487.320
No. of atoms 77
No. of bonds 80
Polar Surface Area 49.42
LOGP Value 5.46      (Computed with XLOGP3)
5.86      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 3
No. of Hydrogen Bond Acceptors: 2
No. of Rotatable Bonds: 10
No. of Nitrogen and Oxygen Atoms: 5
No. of Rings: 4
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P41143  
Entrez Gene IDNCBI Entrez Gene ID: 4985  
ASDInformation of known allosteric effects of PDB entries
 
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