Browse entries in the PDBbind-CN Database

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Related entries of code: 6q5b
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
4wmcRCSB PDB    PDBbind242aa, >4WMC_2|Chains... at 100%
5dtkRCSB PDB    PDBbind265aa, >5DTK_1|Chains... *
5dtsRCSB PDB    PDBbind244aa, >5DTS_1|Chains... at 100%
5dttRCSB PDB    PDBbind244aa, >5DTT_1|Chains... at 100%
5dvaRCSB PDB    PDBbind244aa, >5DVA_1|Chains... at 100%
5faqRCSB PDB    PDBbind241aa, >5FAQ_1|Chains... at 100%
5fasRCSB PDB    PDBbind242aa, >5FAS_1|Chains... at 100%
5fatRCSB PDB    PDBbind243aa, >5FAT_1|Chains... at 100%
5qa4RCSB PDB    PDBbind243aa, >5QA4_1|Chains... at 100%
5qa5RCSB PDB    PDBbind243aa, >5QA5_1|Chains... at 100%
5qa6RCSB PDB    PDBbind243aa, >5QA6_1|Chains... at 100%
5qa7RCSB PDB    PDBbind243aa, >5QA7_1|Chains... at 100%
5qa8RCSB PDB    PDBbind243aa, >5QA8_1|Chains... at 100%
5qa9RCSB PDB    PDBbind243aa, >5QA9_1|Chains... at 100%
5qaaRCSB PDB    PDBbind243aa, >5QAA_1|Chains... at 100%
5qabRCSB PDB    PDBbind243aa, >5QAB_1|Chains... at 100%
5qacRCSB PDB    PDBbind243aa, >5QAC_1|Chains... at 100%
5qadRCSB PDB    PDBbind243aa, >5QAD_1|Chains... at 100%
5qaeRCSB PDB    PDBbind243aa, >5QAE_1|Chains... at 100%
5qafRCSB PDB    PDBbind243aa, >5QAF_1|Chains... at 100%
5qagRCSB PDB    PDBbind243aa, >5QAG_1|Chains... at 100%
5qahRCSB PDB    PDBbind243aa, >5QAH_1|Chains... at 100%
5qaiRCSB PDB    PDBbind243aa, >5QAI_1|Chains... at 100%
5qajRCSB PDB    PDBbind243aa, >5QAJ_1|Chains... at 100%
5qakRCSB PDB    PDBbind243aa, >5QAK_1|Chains... at 100%
5qalRCSB PDB    PDBbind243aa, >5QAL_1|Chains... at 100%
5qamRCSB PDB    PDBbind243aa, >5QAM_1|Chains... at 100%
5qanRCSB PDB    PDBbind243aa, >5QAN_1|Chains... at 100%
5qaoRCSB PDB    PDBbind243aa, >5QAO_1|Chains... at 100%
5qapRCSB PDB    PDBbind243aa, >5QAP_1|Chains... at 100%
5qaqRCSB PDB    PDBbind243aa, >5QAQ_1|Chains... at 100%
5qarRCSB PDB    PDBbind243aa, >5QAR_1|Chains... at 100%
5qasRCSB PDB    PDBbind243aa, >5QAS_1|Chains... at 100%
5qatRCSB PDB    PDBbind243aa, >5QAT_1|Chains... at 100%
5qauRCSB PDB    PDBbind243aa, >5QAU_1|Chains... at 100%
5qavRCSB PDB    PDBbind243aa, >5QAV_1|Chains... at 100%
5qawRCSB PDB    PDBbind243aa, >5QAW_1|Chains... at 100%
5qaxRCSB PDB    PDBbind243aa, >5QAX_1|Chains... at 100%
5qayRCSB PDB    PDBbind243aa, >5QAY_1|Chains... at 100%
5qazRCSB PDB    PDBbind243aa, >5QAZ_1|Chains... at 100%
5qb0RCSB PDB    PDBbind243aa, >5QB0_1|Chains... at 100%
5qb1RCSB PDB    PDBbind243aa, >5QB1_1|Chains... at 100%
5qb2RCSB PDB    PDBbind243aa, >5QB2_1|Chains... at 100%
5qb3RCSB PDB    PDBbind243aa, >5QB3_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
4s2iRCSB PDB    PDBbindNXL
4wm9RCSB PDB    PDBbindNXL
4wmcRCSB PDB    PDBbindNXL
5ne3RCSB PDB    PDBbindNXL
5za2RCSB PDB    PDBbindNXL
6mkqRCSB PDB    PDBbindNXL
6g9fRCSB PDB    PDBbindNXL
6d3gRCSB PDB    PDBbindNXL
5gwaRCSB PDB    PDBbindNXL
Entry Information
PDB ID6q5b
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameBeta-lactamase, OXA-48:P68A
Ligand NameNXL
EC.Number E.C.3.5.2.6
Resolution 2.22(Å)
Affinity (Kd/Ki/IC50)IC50=1.3uM
Release Year2019
Protein/NA SequenceCheck fasta file
Primary Reference (2019) Msphere Vol. 4: pp. e00024-19
Ligand Properties
Formula C7H16N3O6S
Molecular Weight 270.283
Exact Mass 270.076
No. of atoms 33
No. of bonds 33
Polar Surface Area 175.23
LOGP Value -4.23      (Computed with XLOGP3)
-0.63      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 5
No. of Rotatable Bonds: 4
No. of Nitrogen and Oxygen Atoms: 9
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q6XEC0  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
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