Browse entries in the PDBbind-CN Database

Display Options: Structure:  




Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

           
Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 6qi7
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1gx8RCSB PDB    PDBbind162aa, >1GX8_1|Chain... *
2gj5RCSB PDB    PDBbind162aa, >2GJ5_1|Chain... at 100%
2r56RCSB PDB    PDBbind162aa, >2R56_1|Chains... at 100%
3nq3RCSB PDB    PDBbind162aa, >3NQ3_1|Chain... at 100%
3nq9RCSB PDB    PDBbind162aa, >3NQ9_1|Chain... at 100%
3ueuRCSB PDB    PDBbind162aa, >3UEU_1|Chain... at 100%
3uevRCSB PDB    PDBbind162aa, >3UEV_1|Chain... at 100%
3uewRCSB PDB    PDBbind162aa, >3UEW_1|Chain... at 100%
3uexRCSB PDB    PDBbind162aa, >3UEX_1|Chain... at 100%
4gnyRCSB PDB    PDBbind162aa, >4GNY_1|Chain... at 100%
4kiiRCSB PDB    PDBbind162aa, >4KII_1|Chain... at 98%
6ge7RCSB PDB    PDBbind162aa, >6GE7_1|Chain... at 100%
6gf9RCSB PDB    PDBbind162aa, >6GF9_1|Chain... at 100%
6gfsRCSB PDB    PDBbind162aa, >6GFS_1|Chain... at 100%
6ghhRCSB PDB    PDBbind162aa, >6GHH_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1b56RCSB PDB    PDBbindPLM
2hmbRCSB PDB    PDBbindPLM
2hnxRCSB PDB    PDBbindPLM
3l1nRCSB PDB    PDBbindPLM
3qlmRCSB PDB    PDBbindPLM
3uewRCSB PDB    PDBbindPLM
3v2qRCSB PDB    PDBbindPLM
4tkjRCSB PDB    PDBbindPLM
5d1wRCSB PDB    PDBbindPLM
Entry Information
PDB ID6qi7
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein Namebeta-lactoglobulin: variant L39Y
Ligand NamePLM
EC.Number E.C.-.-.-.-
Resolution 2.5(Å)
Affinity (Kd/Ki/IC50)Kd=0.35uM
Release Year2019
Protein/NA SequenceCheck fasta file
Primary Reference (2020) J.Struct.Biol. Vol. : pp. 107493-107493
Ligand Properties
Formula C16H32O2
Molecular Weight 256.424
Exact Mass 256.240
No. of atoms 50
No. of bonds 49
Polar Surface Area 37.3
LOGP Value 8.56      (Computed with XLOGP3)
5.55      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 0
No. of Hydrogen Bond Acceptors: 2
No. of Rotatable Bonds: 13
No. of Nitrogen and Oxygen Atoms: 2
No. of Rings: 0
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P02754  
Entrez Gene IDNCBI Entrez Gene ID: 280838  
ASDInformation of known allosteric effects of PDB entries
 
This site has been visited times since Nov 2007.


Copyright ©2007-2024    涓婃捣鐩堣禌鎬濅俊鎭鎶鏈夐檺鍏徃    缃戠珯澶囨鍙凤細娌狪CP澶2021015625鍙-3    娌叕缃戝畨澶囷細姝ｅ湪鐢宠涓


Technical Support锛堟妧鏈敮鎸侊級: yingsaisi@foxmail.com