Browse entries in the PDBbind-CN Database

Display Options: Structure:  




Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

           
Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 6qyk
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
3wixRCSB PDB    PDBbind161aa, >3WIX_1|Chains... at 90%
3wiyRCSB PDB    PDBbind161aa, >3WIY_1|Chains... at 90%
4hw2RCSB PDB    PDBbind153aa, >4HW2_1|Chains... at 96%
4hw3RCSB PDB    PDBbind153aa, >4HW3_1|Chains... at 96%
4oq6RCSB PDB    PDBbind157aa, >4OQ6_1|Chains... at 92%
4wgiRCSB PDB    PDBbind518aa, >4WGI_1|Chain... *
4wmuRCSB PDB    PDBbind518aa, >4WMU_1|Chain... at 100%
4wmvRCSB PDB    PDBbind518aa, >4WMV_1|Chain... at 100%
4wmxRCSB PDB    PDBbind518aa, >4WMX_1|Chain... at 100%
4zbfRCSB PDB    PDBbind157aa, >4ZBF_1|Chains... at 93%
4zbiRCSB PDB    PDBbind157aa, >4ZBI_1|Chains... at 93%
5fdoRCSB PDB    PDBbind150aa, >5FDO_1|Chains... at 97%
5fdrRCSB PDB    PDBbind158aa, >5FDR_1|Chains... at 92%
5iezRCSB PDB    PDBbind159aa, >5IEZ_1|Chains... at 91%
5if4RCSB PDB    PDBbind159aa, >5IF4_1|Chains... at 91%
5vkcRCSB PDB    PDBbind157aa, >5VKC_1|Chains... at 92%
6b4lRCSB PDB    PDBbind157aa, >6B4L_1|Chains... at 92%
6b4uRCSB PDB    PDBbind157aa, >6B4U_1|Chain... at 92%
6bw2RCSB PDB    PDBbind158aa, >6BW2_1|Chains... at 92%
6bw8RCSB PDB    PDBbind158aa, >6BW8_1|Chains... at 92%
6dm8RCSB PDB    PDBbind518aa, >6DM8_1|Chains... at 96%
6fs1RCSB PDB    PDBbind150aa, >6FS1_1|Chains... at 92%
6qz7RCSB PDB    PDBbind518aa, >6QZ7_1|Chain... at 99%
6qyoRCSB PDB    PDBbind518aa, >6QYO_1|Chain... at 99%
6qynRCSB PDB    PDBbind518aa, >6QYN_1|Chain... at 99%
6qylRCSB PDB    PDBbind518aa, >6QYL_1|Chain... at 99%
6qxjRCSB PDB    PDBbind518aa, >6QXJ_1|Chain... at 99%
6p3pRCSB PDB    PDBbind157aa, >6P3P_1|Chain... at 92%
6oqnRCSB PDB    PDBbind157aa, >6OQN_1|Chains... at 92%
6oqdRCSB PDB    PDBbind157aa, >6OQD_1|Chain... at 92%
6oqcRCSB PDB    PDBbind157aa, >6OQC_1|Chains... at 92%
6oqbRCSB PDB    PDBbind157aa, >6OQB_1|Chain... at 92%
6o6gRCSB PDB    PDBbind156aa, >6O6G_1|Chain... at 93%
6o6fRCSB PDB    PDBbind158aa, >6O6F_1|Chains... at 92%
6ne5RCSB PDB    PDBbind159aa, >6NE5_1|Chains... at 91%
6ud2RCSB PDB    PDBbind157aa, >6UD2_1|Chain... at 92%
6udiRCSB PDB    PDBbind157aa, >6UDI_1|Chain... at 92%
6udtRCSB PDB    PDBbind157aa, >6UDT_1|Chain... at 92%
6uduRCSB PDB    PDBbind157aa, >6UDU_1|Chain... at 92%
6udvRCSB PDB    PDBbind157aa, >6UDV_1|Chain... at 92%
6udxRCSB PDB    PDBbind157aa, >6UDX_1|Chains... at 92%
6udyRCSB PDB    PDBbind157aa, >6UDY_1|Chains... at 92%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID6qyk
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameMBP-Mcl-1
Ligand NameJLB
EC.Number E.C.-.-.-.-
Resolution 2.3(Å)
Affinity (Kd/Ki/IC50)Ki=2.8uM
Release Year2019
Protein/NA SequenceCheck fasta file
Primary Reference (2019) J.Med.Chem. Vol. 62: pp. 6913-6924
Ligand Properties
Formula C19H17N3O3S
Molecular Weight 367.422
Exact Mass 367.099
No. of atoms 43
No. of bonds 46
Polar Surface Area 116.34
LOGP Value 5.32      (Computed with XLOGP3)
4.25      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 4
No. of Rotatable Bonds: 4
No. of Nitrogen and Oxygen Atoms: 6
No. of Rings: 4
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P0AEX9  Q07820  
Entrez Gene IDNCBI Entrez Gene ID: 61753691  948538  4170  
ASDInformation of known allosteric effects of PDB entries
 
This site has been visited times since Nov 2007.


Copyright ©2007-2024    涓婃捣鐩堣禌鎬濅俊鎭鎶鏈夐檺鍏徃    缃戠珯澶囨鍙凤細娌狪CP澶2021015625鍙-3    娌叕缃戝畨澶囷細姝ｅ湪鐢宠涓


Technical Support锛堟妧鏈敮鎸侊級: yingsaisi@foxmail.com