Browse entries in the PDBbind-CN Database

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Related entries of code: 6qz8
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
4oq5RCSB PDB    PDBbind163aa, >4OQ5_1|Chains... at 93%
5ku9RCSB PDB    PDBbind162aa, >5KU9_1|Chains... at 90%
5mesRCSB PDB    PDBbind162aa, >5MES_1|Chain... at 90%
5mevRCSB PDB    PDBbind162aa, >5MEV_1|Chain... at 90%
6fs0RCSB PDB    PDBbind159aa, >6FS0_1|Chain... at 90%
6qzbRCSB PDB    PDBbind170aa, >6QZB_1|Chain... at 91%
6qz6RCSB PDB    PDBbind170aa, >6QZ6_1|Chain... at 91%
6qz5RCSB PDB    PDBbind170aa, >6QZ5_1|Chain... at 91%
6qypRCSB PDB    PDBbind170aa, >6QYP_1|Chain... at 91%
6qfqRCSB PDB    PDBbind170aa, >6QFQ_1|Chain... at 91%
6qb6RCSB PDB    PDBbind162aa, >6QB6_1|Chain... at 90%
6qb3RCSB PDB    PDBbind162aa, >6QB3_1|Chain... at 90%
6ovcRCSB PDB    PDBbind164aa, >6OVC_1|Chain... at 94%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
6qynRCSB PDB    PDBbindJL8
Entry Information
PDB ID6qz8
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameMcl-1
Ligand NameJL8
EC.Number E.C.-.-.-.-
Resolution 2.15(Å)
Affinity (Kd/Ki/IC50)Kd=0.024uM
Release Year2019
Protein/NA SequenceCheck fasta file
Primary Reference (2019) J.Med.Chem. Vol. 62: pp. 6913-6924
Ligand Properties
Formula C24H21ClN2O4S
Molecular Weight 468.953
Exact Mass 468.091
No. of atoms 53
No. of bonds 56
Polar Surface Area 120.78
LOGP Value 7.42      (Computed with XLOGP3)
5.66      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 5
No. of Rotatable Bonds: 7
No. of Nitrogen and Oxygen Atoms: 6
No. of Rings: 4
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q07820  
Entrez Gene IDNCBI Entrez Gene ID: 4170  
ASDInformation of known allosteric effects of PDB entries
 
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