Browse entries in the PDBbind-CN Database

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Related entries of code: 6t1o
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
6hpwRCSB PDB    PDBbind155aa, >6HPW_1|Chain... *
6ht1RCSB PDB    PDBbind155aa, >6HT1_1|Chain... at 100%
6t1iRCSB PDB    PDBbind154aa, >6T1I_1|Chain... at 100%
6t1jRCSB PDB    PDBbind154aa, >6T1J_1|Chain... at 100%
6t1lRCSB PDB    PDBbind154aa, >6T1L_1|Chain... at 100%
6t1mRCSB PDB    PDBbind154aa, >6T1M_1|Chain... at 100%
6t1nRCSB PDB    PDBbind154aa, >6T1N_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID6t1o
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameMLLT1 (ENL) YEATS domain
Ligand NameM82
EC.Number E.C.-.-.-.-
Resolution 1.9(Å)
Affinity (Kd/Ki/IC50)Kd=2.6uM
Release Year2019
Protein/NA SequenceCheck fasta file
Primary Reference (2019) Acs Med.Chem.Lett. Vol. 10: pp. 1661-1666
Ligand Properties
Formula C20H22IN4O
Molecular Weight 461.319
Exact Mass 461.084
No. of atoms 48
No. of bonds 51
Polar Surface Area 62.22
LOGP Value 3.69      (Computed with XLOGP3)
4.63      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 3
No. of Hydrogen Bond Acceptors: 2
No. of Rotatable Bonds: 5
No. of Nitrogen and Oxygen Atoms: 5
No. of Rings: 4
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q03111  
Entrez Gene IDNCBI Entrez Gene ID: 4298  
ASDInformation of known allosteric effects of PDB entries

 
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