Browse entries in the PDBbind-CN Database

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Related entries of code: 6tim
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1iigRCSB PDB    PDBbind250aa, >1IIG_1|Chains... *
1iihRCSB PDB    PDBbind250aa, >1IIH_1|Chains... at 100%
1kv5RCSB PDB    PDBbind250aa, >1KV5_1|Chains... at 99%
1ml1RCSB PDB    PDBbind243aa, >1ML1_1|Chains... at 95%
1trdRCSB PDB    PDBbind250aa, >1TRD_1|Chains... at 100%
1tsiRCSB PDB    PDBbind250aa, >1TSI_1|Chains... at 99%
2j27RCSB PDB    PDBbind250aa, >2J27_1|Chains... at 99%
2v2cRCSB PDB    PDBbind250aa, >2V2C_1|Chain... at 99%
2v2hRCSB PDB    PDBbind242aa, >2V2H_1|Chains... at 95%
4timRCSB PDB    PDBbind250aa, >4TIM_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
4aq4RCSB PDB    PDBbindG3P
4wn0RCSB PDB    PDBbindG3P
Entry Information
PDB ID6tim
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Nametriosephosphate isomerase
Ligand NameG3P
EC.Number E.C.5.3.1.1
Resolution 2.2(Å)
Affinity (Kd/Ki/IC50)Ki=0.61mM
Release Year1992
Protein/NA SequenceCheck fasta file
Primary Reference Proteins v10 pp. 50-69, 1991
Ligand Properties
Formula C3H10O6P
Molecular Weight 173.082
Exact Mass 173.021
No. of atoms 20
No. of bonds 19
Polar Surface Area 123.97
LOGP Value -3.02      (Computed with XLOGP3)
-1.99      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 5
No. of Rotatable Bonds: 5
No. of Nitrogen and Oxygen Atoms: 6
No. of Rings: 0
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P04789  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
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