Browse entries in the PDBbind-CN Database

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Related entries of code: 8abp
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1abfRCSB PDB    PDBbind306aa, >1ABF_1|Chain... *
1apbRCSB PDB    PDBbind306aa, >1APB_1|Chain... at 99%
1bapRCSB PDB    PDBbind306aa, >1BAP_1|Chain... at 99%
5abpRCSB PDB    PDBbind306aa, >5ABP_1|Chain... at 100%
6abpRCSB PDB    PDBbind306aa, >6ABP_1|Chain... at 99%
7abpRCSB PDB    PDBbind306aa, >7ABP_1|Chain... at 99%
9abpRCSB PDB    PDBbind306aa, >9ABP_1|Chain... at 99%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
5abpRCSB PDB    PDBbindGLA/GLB
9abpRCSB PDB    PDBbindGLA/GLB

Entry Information
PDB ID8abp
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Nameapolipoprotein
Ligand NameGLA/GLB
EC.Number E.C.-.-.-.-
Resolution 1.49(Å)
Affinity (Kd/Ki/IC50)Kd=0.010uM
Release Year1991
Protein/NA SequenceCheck fasta file
Primary Reference Biochemistry v30 pp. 6861-6, 1991
Ligand Properties
Formula C6H12O6
Molecular Weight 180.156
Exact Mass 180.063
No. of atoms 24
No. of bonds 24
Polar Surface Area 110.38
LOGP Value -2.59      (Computed with XLOGP3)
-3.22      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 5
No. of Hydrogen Bond Acceptors: 5
No. of Rotatable Bonds: 6
No. of Nitrogen and Oxygen Atoms: 6
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P02924  
Entrez Gene IDNCBI Entrez Gene ID: 61755439  946409  
ASDInformation of known allosteric effects of PDB entries

 
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