Browse entries in the PDBbind-CN Database

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Related entries of code: 1bqo
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1b8yRCSB PDB    PDBbind167aa, >1B8Y_1|Chain... at 100%
1biwRCSB PDB    PDBbind173aa, >1BIW_1|Chains... *
1bm6RCSB PDB    PDBbind173aa, >1BM6_1|Chain... at 100%
1c3iRCSB PDB    PDBbind173aa, >1C3I_1|Chains... at 100%
1caqRCSB PDB    PDBbind168aa, >1CAQ_1|Chain... at 100%
1cizRCSB PDB    PDBbind168aa, >1CIZ_1|Chain... at 100%
1d5jRCSB PDB    PDBbind173aa, >1D5J_1|Chains... at 100%
1d7xRCSB PDB    PDBbind173aa, >1D7X_1|Chains... at 100%
1d8fRCSB PDB    PDBbind173aa, >1D8F_1|Chains... at 100%
1d8mRCSB PDB    PDBbind173aa, >1D8M_1|Chains... at 100%
1g05RCSB PDB    PDBbind173aa, >1G05_1|Chains... at 100%
1g49RCSB PDB    PDBbind173aa, >1G49_1|Chains... at 100%
1g4kRCSB PDB    PDBbind168aa, >1G4K_1|Chains... at 100%
1hfsRCSB PDB    PDBbind160aa, >1HFS_1|Chain... at 100%
1hy7RCSB PDB    PDBbind173aa, >1HY7_1|Chains... at 100%
1slnRCSB PDB    PDBbind173aa, >1SLN_1|Chain... at 100%
1usnRCSB PDB    PDBbind165aa, >1USN_1|Chain... at 100%
2d1oRCSB PDB    PDBbind171aa, >2D1O_1|Chains... at 100%
2jnpRCSB PDB    PDBbind161aa, >2JNP_1|Chain... at 100%
2jt5RCSB PDB    PDBbind161aa, >2JT5_1|Chain... at 100%
2jt6RCSB PDB    PDBbind161aa, >2JT6_1|Chain... at 100%
2srtRCSB PDB    PDBbind173aa, >2SRT_1|Chain... at 100%
2usnRCSB PDB    PDBbind165aa, >2USN_1|Chain... at 100%
3usnRCSB PDB    PDBbind168aa, >3USN_1|Chain... at 100%
6n9dRCSB PDB    PDBbind165aa, >6N9D_1|Chain... at 100%
6mavRCSB PDB    PDBbind168aa, >6MAV_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID1bqo
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Namestromelysin-1
Ligand NameN25
EC.Number E.C.3.4.24.17
Resolution 2.3(Å)
Affinity (Kd/Ki/IC50)IC50=18.4nM
Release Year1999
Protein/NA SequenceCheck fasta file
Primary Reference J.Med.Chem. v41 pp. 3568-71, 1998
Ligand Properties
Formula C21H27N3O8S2
Molecular Weight 513.584
Exact Mass 513.124
No. of atoms 61
No. of bonds 63
Polar Surface Area 159.31
LOGP Value 1.81      (Computed with XLOGP3)
3.69      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 6
No. of Rotatable Bonds: 9
No. of Nitrogen and Oxygen Atoms: 11
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P08254  
Entrez Gene IDNCBI Entrez Gene ID: 4314  
ASDInformation of known allosteric effects of PDB entries
 
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