Browse entries in the PDBbind-CN Database

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Related entries of code: 2jnp
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1b8yRCSB PDB    PDBbind167aa, >1B8Y_1|Chain... at 100%
1biwRCSB PDB    PDBbind173aa, >1BIW_1|Chains... *
1bm6RCSB PDB    PDBbind173aa, >1BM6_1|Chain... at 100%
1bqoRCSB PDB    PDBbind173aa, >1BQO_1|Chains... at 100%
1c3iRCSB PDB    PDBbind173aa, >1C3I_1|Chains... at 100%
1caqRCSB PDB    PDBbind168aa, >1CAQ_1|Chain... at 100%
1cizRCSB PDB    PDBbind168aa, >1CIZ_1|Chain... at 100%
1d5jRCSB PDB    PDBbind173aa, >1D5J_1|Chains... at 100%
1d7xRCSB PDB    PDBbind173aa, >1D7X_1|Chains... at 100%
1d8fRCSB PDB    PDBbind173aa, >1D8F_1|Chains... at 100%
1d8mRCSB PDB    PDBbind173aa, >1D8M_1|Chains... at 100%
1g05RCSB PDB    PDBbind173aa, >1G05_1|Chains... at 100%
1g49RCSB PDB    PDBbind173aa, >1G49_1|Chains... at 100%
1g4kRCSB PDB    PDBbind168aa, >1G4K_1|Chains... at 100%
1hfsRCSB PDB    PDBbind160aa, >1HFS_1|Chain... at 100%
1hy7RCSB PDB    PDBbind173aa, >1HY7_1|Chains... at 100%
1slnRCSB PDB    PDBbind173aa, >1SLN_1|Chain... at 100%
1usnRCSB PDB    PDBbind165aa, >1USN_1|Chain... at 100%
2d1oRCSB PDB    PDBbind171aa, >2D1O_1|Chains... at 100%
2jt5RCSB PDB    PDBbind161aa, >2JT5_1|Chain... at 100%
2jt6RCSB PDB    PDBbind161aa, >2JT6_1|Chain... at 100%
2srtRCSB PDB    PDBbind173aa, >2SRT_1|Chain... at 100%
2usnRCSB PDB    PDBbind165aa, >2USN_1|Chain... at 100%
3usnRCSB PDB    PDBbind168aa, >3USN_1|Chain... at 100%
6n9dRCSB PDB    PDBbind165aa, >6N9D_1|Chain... at 100%
6mavRCSB PDB    PDBbind168aa, >6MAV_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1rmzRCSB PDB    PDBbindNGH
1ycmRCSB PDB    PDBbindNGH
1z3jRCSB PDB    PDBbindNGH
2jsdRCSB PDB    PDBbindNGH
Entry Information
PDB ID2jnp
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameMatrix metalloproteinase-3
Ligand NameNGH
EC.Number E.C.3.4.24.17
Resolution NMR
Affinity (Kd/Ki/IC50)Ki=130nM
Release Year2007
Protein/NA SequenceCheck fasta file
Primary Reference J. Biol. Inorg. Chem. 2007, 12, 1197-1206.
Ligand Properties
Formula C13H18N2O5S
Molecular Weight 314.357
Exact Mass 314.094
No. of atoms 39
No. of bonds 39
Polar Surface Area 101.49
LOGP Value 1.69      (Computed with XLOGP3)
2.72      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 0
No. of Hydrogen Bond Acceptors: 4
No. of Rotatable Bonds: 7
No. of Nitrogen and Oxygen Atoms: 7
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P08254  
Entrez Gene IDNCBI Entrez Gene ID: 4314  
ASDInformation of known allosteric effects of PDB entries
 
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