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Related entries of code: 1dpu
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
No similar entries are found!
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1bxlRCSB PDB    PDBbind16-mer
1dxpRCSB PDB    PDBbind16-mer
1g1eRCSB PDB    PDBbind16-mer
1j19RCSB PDB    PDBbind16-mer
1ok7RCSB PDB    PDBbind16-mer
1pmxRCSB PDB    PDBbind16-mer
1r17RCSB PDB    PDBbind16-mer
1s5qRCSB PDB    PDBbind16-mer
1sjeRCSB PDB    PDBbind16-mer
1t2vRCSB PDB    PDBbind16-mer
1u8tRCSB PDB    PDBbind16-mer
1utiRCSB PDB    PDBbind16-mer
1vyjRCSB PDB    PDBbind16-mer
1y3aRCSB PDB    PDBbind16-mer
2b2vRCSB PDB    PDBbind16-mer
2fluRCSB PDB    PDBbind16-mer
2fx7RCSB PDB    PDBbind16-mer
2gphRCSB PDB    PDBbind16-mer
2ivzRCSB PDB    PDBbind16-mer
2k3wRCSB PDB    PDBbind16-mer
2kohRCSB PDB    PDBbind16-mer
2kvmRCSB PDB    PDBbind16-mer
2lcsRCSB PDB    PDBbind16-mer
2lskRCSB PDB    PDBbind16-mer
2lsrRCSB PDB    PDBbind16-mer
2mg5RCSB PDB    PDBbind16-mer
2mpmRCSB PDB    PDBbind16-mer
2mpsRCSB PDB    PDBbind16-mer
2n1gRCSB PDB    PDBbind16-mer
3ehtRCSB PDB    PDBbind16-mer
3g5vRCSB PDB    PDBbind16-mer
3g5yRCSB PDB    PDBbind16-mer
3g7lRCSB PDB    PDBbind16-mer
3k48RCSB PDB    PDBbind16-mer
3nflRCSB PDB    PDBbind16-mer
3oe0RCSB PDB    PDBbind16-mer
3tduRCSB PDB    PDBbind16-mer
3twrRCSB PDB    PDBbind16-mer
3twsRCSB PDB    PDBbind16-mer
3twuRCSB PDB    PDBbind16-mer
3twvRCSB PDB    PDBbind16-mer
3twwRCSB PDB    PDBbind16-mer
3twxRCSB PDB    PDBbind16-mer
3v3bRCSB PDB    PDBbind16-mer
3zqiRCSB PDB    PDBbind16-mer
4a2aRCSB PDB    PDBbind16-mer
4a7jRCSB PDB    PDBbind16-mer
4eduRCSB PDB    PDBbind16-mer
4hs6RCSB PDB    PDBbind16-mer
4hs8RCSB PDB    PDBbind16-mer
4is6RCSB PDB    PDBbind16-mer
4j8rRCSB PDB    PDBbind16-mer
4l3oRCSB PDB    PDBbind16-mer
4nufRCSB PDB    PDBbind16-mer
4odkRCSB PDB    PDBbind16-mer
4odlRCSB PDB    PDBbind16-mer
4odmRCSB PDB    PDBbind16-mer
4odpRCSB PDB    PDBbind16-mer
4odqRCSB PDB    PDBbind16-mer
4pz5RCSB PDB    PDBbind16-mer
4qq4RCSB PDB    PDBbind16-mer
4tzmRCSB PDB    PDBbind16-mer
4tznRCSB PDB    PDBbind16-mer
4u2wRCSB PDB    PDBbind16-mer
4ud7RCSB PDB    PDBbind16-mer
4ue1RCSB PDB    PDBbind16-mer
4wciRCSB PDB    PDBbind16-mer
4wy7RCSB PDB    PDBbind16-mer
4yhpRCSB PDB    PDBbind16-mer
4zduRCSB PDB    PDBbind16-mer
5etaRCSB PDB    PDBbind16-mer
5hhxRCSB PDB    PDBbind16-mer
5iayRCSB PDB    PDBbind16-mer
5icxRCSB PDB    PDBbind16-mer
5iy4RCSB PDB    PDBbind16-mer
5klrRCSB PDB    PDBbind16-mer
5kltRCSB PDB    PDBbind16-mer
5lvfRCSB PDB    PDBbind16-mer
5ly3RCSB PDB    PDBbind16-mer
5m9dRCSB PDB    PDBbind16-mer
5mykRCSB PDB    PDBbind16-mer
5myxRCSB PDB    PDBbind16-mer
5ninRCSB PDB    PDBbind16-mer
5njxRCSB PDB    PDBbind16-mer
5o4yRCSB PDB    PDBbind16-mer
5u2jRCSB PDB    PDBbind16-mer
5v1yRCSB PDB    PDBbind16-mer
5v6yRCSB PDB    PDBbind16-mer
5wa4RCSB PDB    PDBbind16-mer
5wblRCSB PDB    PDBbind16-mer
5wqdRCSB PDB    PDBbind16-mer
5y7wRCSB PDB    PDBbind16-mer
6bhiRCSB PDB    PDBbind16-mer
6g84RCSB PDB    PDBbind16-mer
6g85RCSB PDB    PDBbind16-mer
6g86RCSB PDB    PDBbind16-mer
6h0bRCSB PDB    PDBbind16-mer
6qszRCSB PDB    PDBbind16-mer
6pi7RCSB PDB    PDBbind16-mer
6me1RCSB PDB    PDBbind16-mer
6d08RCSB PDB    PDBbind16-mer
6d07RCSB PDB    PDBbind16-mer
5zmlRCSB PDB    PDBbind16-mer
5w4eRCSB PDB    PDBbind16-mer
6tyzRCSB PDB    PDBbind16-mer
Entry Information
PDB ID1dpu
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameRPA32(C-terminal domain of Replication protein A,172-270)
Ligand Name16-mer
EC.Number E.C.-.-.-.-
Resolution NMR
Affinity (Kd/Ki/IC50)Kd=1uM
Release Year2000
Protein/NA SequenceCheck fasta file
Primary Reference (2000) Cell(Cambridge,Mass.) Vol. 103: pp. 449-456
Ligand Properties
Formula C78H151N31O19
Molecular Weight 1827.230
Exact Mass 1826.180
No. of atoms 279
No. of bonds 278
Polar Surface Area 879.3
LOGP Value 0.08      (Computed with XLOGP3)
-5.81      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 19
No. of Hydrogen Bond Acceptors: 19
No. of Rotatable Bonds: 78
No. of Nitrogen and Oxygen Atoms: 50
No. of Rings: 0
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P15927  P13051  
Entrez Gene IDNCBI Entrez Gene ID: 6118  7374  
ASDInformation of known allosteric effects of PDB entries
 
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