Browse entries in the PDBbind-CN Database

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Related entries of code: 1f3e
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1enuRCSB PDB    PDBbind386aa, >1ENU_1|Chain... at 100%
1k4gRCSB PDB    PDBbind386aa, >1K4G_1|Chain... at 100%
1k4hRCSB PDB    PDBbind386aa, >1K4H_1|Chain... at 100%
1n2vRCSB PDB    PDBbind386aa, >1N2V_1|Chain... at 100%
1q4wRCSB PDB    PDBbind386aa, >1Q4W_1|Chain... at 100%
1q63RCSB PDB    PDBbind386aa, >1Q63_1|Chain... at 100%
1q65RCSB PDB    PDBbind386aa, >1Q65_1|Chain... at 100%
1q66RCSB PDB    PDBbind386aa, >1Q66_1|Chain... at 100%
1r5yRCSB PDB    PDBbind386aa, >1R5Y_1|Chain... at 100%
1s38RCSB PDB    PDBbind386aa, >1S38_1|Chain... at 100%
1s39RCSB PDB    PDBbind386aa, >1S39_1|Chain... at 100%
2qzrRCSB PDB    PDBbind385aa, >2QZR_1|Chain... at 100%
2z1wRCSB PDB    PDBbind386aa, >2Z1W_1|Chain... at 99%
3eosRCSB PDB    PDBbind386aa, >3EOS_1|Chain... at 100%
3eouRCSB PDB    PDBbind386aa, >3EOU_1|Chain... at 100%
3gc4RCSB PDB    PDBbind386aa, >3GC4_1|Chain... at 100%
3gc5RCSB PDB    PDBbind386aa, >3GC5_1|Chain... at 100%
3ge7RCSB PDB    PDBbind386aa, >3GE7_1|Chain... at 100%
3rr4RCSB PDB    PDBbind386aa, >3RR4_1|Chain... at 100%
3s1gRCSB PDB    PDBbind386aa, >3S1G_1|Chain... at 100%
3sm0RCSB PDB    PDBbind386aa, >3SM0_1|Chain... at 100%
3tllRCSB PDB    PDBbind386aa, >3TLL_1|Chain... at 100%
4kwoRCSB PDB    PDBbind388aa, >4KWO_1|Chain... *
4lbuRCSB PDB    PDBbind388aa, >4LBU_1|Chain... at 100%
4leqRCSB PDB    PDBbind388aa, >4LEQ_1|Chain... at 100%
4pujRCSB PDB    PDBbind386aa, >4PUJ_1|Chain... at 100%
4pukRCSB PDB    PDBbind386aa, >4PUK_1|Chain... at 100%
4pulRCSB PDB    PDBbind386aa, >4PUL_1|Chain... at 99%
4pumRCSB PDB    PDBbind388aa, >4PUM_1|Chain... at 99%
4q4oRCSB PDB    PDBbind386aa, >4Q4O_1|Chain... at 100%
4q4pRCSB PDB    PDBbind386aa, >4Q4P_1|Chain... at 100%
4q4qRCSB PDB    PDBbind386aa, >4Q4Q_1|Chain... at 100%
4q4rRCSB PDB    PDBbind386aa, >4Q4R_1|Chain... at 100%
4q4sRCSB PDB    PDBbind386aa, >4Q4S_1|Chain... at 100%
5jxqRCSB PDB    PDBbind386aa, >5JXQ_1|Chain... at 100%
6fpuRCSB PDB    PDBbind386aa, >6FPU_1|Chain... at 100%
6fmnRCSB PDB    PDBbind386aa, >6FMN_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID1f3e
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NametRNA-guanine transglycosylase
Ligand NameDPZ
EC.Number E.C.2.4.2.29
Resolution 1.85(Å)
Affinity (Kd/Ki/IC50)Ki=0.2uM
Release Year2000
Protein/NA SequenceCheck fasta file
Primary Reference J.Mol.Biol. v306 pp. 455-67, 2001
Ligand Properties
Formula C8H8N4O2
Molecular Weight 192.175
Exact Mass 192.065
No. of atoms 22
No. of bonds 23
Polar Surface Area 117.76
LOGP Value -0.37      (Computed with XLOGP3)
0.54      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 4
No. of Hydrogen Bond Acceptors: 2
No. of Rotatable Bonds: 0
No. of Nitrogen and Oxygen Atoms: 6
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P28720  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
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