Browse entries in the PDBbind-CN Database

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Related entries of code: 1f4y
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1etzRCSB PDB    PDBbind215aa, >1ETZ_1|Chains... *
1f4xRCSB PDB    PDBbind210aa, >1F4X_1|Chain... at 93%
1indRCSB PDB    PDBbind215aa, >1IND_1|Chain... at 94%
1mfdRCSB PDB    PDBbind215aa, >1MFD_1|Chain... at 92%
2ntfRCSB PDB    PDBbind211aa, >2NTF_1|Chains... at 93%
2virRCSB PDB    PDBbind210aa, >2VIR_1|Chain... at 97%
2visRCSB PDB    PDBbind210aa, >2VIS_1|Chain... at 97%
2zpkRCSB PDB    PDBbind212aa, >2ZPK_1|Chains... at 96%
4tnwRCSB PDB    PDBbind215aa, >4TNW_3|Chains... at 95%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID1f4y
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Nameantibody fab fragment, light chain
Ligand NameMGU
EC.Number E.C.-.-.-.-
Resolution 2.8(Å)
Affinity (Kd/Ki/IC50)Kd=0.83uM
Release Year2000
Protein/NA SequenceCheck fasta file
Primary Reference Proc.Natl.Acad.Sci.USA v97 pp. 8433-8, 2000
Ligand Properties
Formula C22H40N2O13
Molecular Weight 540.559
Exact Mass 540.253
No. of atoms 77
No. of bonds 78
Polar Surface Area 225.73
LOGP Value -4.00      (Computed with XLOGP3)
-3.52      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 8
No. of Hydrogen Bond Acceptors: 8
No. of Rotatable Bonds: 20
No. of Nitrogen and Oxygen Atoms: 15
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACNo matched UniProt accession number (AC) found!
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
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