Browse entries in the PDBbind-CN Database

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Related entries of code: 2ntf
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1etzRCSB PDB    PDBbind215aa, >1ETZ_1|Chains... *
1f4xRCSB PDB    PDBbind210aa, >1F4X_1|Chain... at 93%
1f4yRCSB PDB    PDBbind210aa, >1F4Y_1|Chain... at 94%
1indRCSB PDB    PDBbind215aa, >1IND_1|Chain... at 94%
1mfdRCSB PDB    PDBbind215aa, >1MFD_1|Chain... at 92%
2virRCSB PDB    PDBbind210aa, >2VIR_1|Chain... at 97%
2visRCSB PDB    PDBbind210aa, >2VIS_1|Chain... at 97%
2zpkRCSB PDB    PDBbind212aa, >2ZPK_1|Chains... at 96%
4tnwRCSB PDB    PDBbind215aa, >4TNW_3|Chains... at 95%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID2ntf
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameMurine Antibody Fab RS2-1G9
Ligand NameOHM
EC.Number E.C.-.-.-.-
Resolution 3.18(Å)
Affinity (Kd/Ki/IC50)Kd=300nM
Release Year2007
Protein/NA SequenceCheck fasta file
Primary Reference J. Mol. Biol. 2007, 368, 1392-1402.
Ligand Properties
Formula C16H28N2O3
Molecular Weight 296.405
Exact Mass 296.210
No. of atoms 49
No. of bonds 49
Polar Surface Area 75.27
LOGP Value 3.53      (Computed with XLOGP3)
2.81      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 12
No. of Nitrogen and Oxygen Atoms: 5
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q99LC4  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
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