Browse entries in the PDBbind-CN Database

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Related entries of code: 1fo2
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1fo3RCSB PDB    PDBbind460aa, >1FO3_1|Chain... at 99%
1x9dRCSB PDB    PDBbind538aa, >1X9D_1|Chain... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1hxkRCSB PDB    PDBbindDMJ
5mehRCSB PDB    PDBbindDMJ

Entry Information
PDB ID1fo2
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Namealpha 1,2-mannosidase
Ligand NameDMJ
EC.Number E.C.3.2.1.24
Resolution 2.38(Å)
Affinity (Kd/Ki/IC50)IC50=20uM
Release Year2001
Protein/NA SequenceCheck fasta file
Primary Reference J.Biol.Chem. v275 pp. 41287-98, 2000
Ligand Properties
Formula C6H14NO4
Molecular Weight 164.180
Exact Mass 164.092
No. of atoms 25
No. of bonds 25
Polar Surface Area 97.53
LOGP Value -2.35      (Computed with XLOGP3)
-2.42      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 5
No. of Hydrogen Bond Acceptors: 4
No. of Rotatable Bonds: 5
No. of Nitrogen and Oxygen Atoms: 5
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q9UKM7  
Entrez Gene IDNCBI Entrez Gene ID: 11253  
ASDInformation of known allosteric effects of PDB entries

 
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