Browse entries in the PDBbind-CN Database

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Related entries of code: 1gi8
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1c5xRCSB PDB    PDBbind23aa, >1C5X_1|Chain... *
1c5yRCSB PDB    PDBbind23aa, >1C5Y_1|Chain... at 100%
1c5zRCSB PDB    PDBbind23aa, >1C5Z_1|Chain... at 100%
1gi7RCSB PDB    PDBbind23aa, >1GI7_1|Chain... at 100%
1gi9RCSB PDB    PDBbind23aa, >1GI9_1|Chain... at 100%
1gj7RCSB PDB    PDBbind23aa, >1GJ7_1|Chain... at 100%
1gj8RCSB PDB    PDBbind23aa, >1GJ8_1|Chain... at 100%
1gjaRCSB PDB    PDBbind23aa, >1GJA_1|Chain... at 100%
1gjbRCSB PDB    PDBbind23aa, >1GJB_1|Chain... at 100%
1gjcRCSB PDB    PDBbind23aa, >1GJC_1|Chain... at 100%
1gjdRCSB PDB    PDBbind23aa, >1GJD_1|Chain... at 100%
1o3pRCSB PDB    PDBbind23aa, >1O3P_1|Chain... at 100%
1o5aRCSB PDB    PDBbind23aa, >1O5A_1|Chain... at 100%
1o5bRCSB PDB    PDBbind23aa, >1O5B_1|Chain... at 100%
1o5cRCSB PDB    PDBbind23aa, >1O5C_1|Chain... at 100%
3ig6RCSB PDB    PDBbind23aa, >3IG6_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1ghwRCSB PDB    PDBbindBMZ
1gi1RCSB PDB    PDBbindBMZ
Entry Information
PDB ID1gi8
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Nameurokinase-type plasminogen activator
Ligand NameBMZ
EC.Number E.C.3.4.21.73
Resolution 1.75(Å)
Affinity (Kd/Ki/IC50)Ki=8.9uM
Release Year2002
Protein/NA SequenceCheck fasta file
Primary Reference J.Mol.Biol. v307 pp. 1451-86, 2001
Ligand Properties
Formula C14H13N4O
Molecular Weight 253.279
Exact Mass 253.109
No. of atoms 32
No. of bonds 34
Polar Surface Area 100.52
LOGP Value 3.58      (Computed with XLOGP3)
1.10      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 2
No. of Rotatable Bonds: 3
No. of Nitrogen and Oxygen Atoms: 5
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P00749  
Entrez Gene IDNCBI Entrez Gene ID: 5328  
ASDInformation of known allosteric effects of PDB entries
 
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