Browse entries in the PDBbind-CN Database

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Related entries of code: 1o5a
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1c5xRCSB PDB    PDBbind23aa, >1C5X_1|Chain... *
1c5yRCSB PDB    PDBbind23aa, >1C5Y_1|Chain... at 100%
1c5zRCSB PDB    PDBbind23aa, >1C5Z_1|Chain... at 100%
1gi7RCSB PDB    PDBbind23aa, >1GI7_1|Chain... at 100%
1gi8RCSB PDB    PDBbind23aa, >1GI8_1|Chain... at 100%
1gi9RCSB PDB    PDBbind23aa, >1GI9_1|Chain... at 100%
1gj7RCSB PDB    PDBbind23aa, >1GJ7_1|Chain... at 100%
1gj8RCSB PDB    PDBbind23aa, >1GJ8_1|Chain... at 100%
1gjaRCSB PDB    PDBbind23aa, >1GJA_1|Chain... at 100%
1gjbRCSB PDB    PDBbind23aa, >1GJB_1|Chain... at 100%
1gjcRCSB PDB    PDBbind23aa, >1GJC_1|Chain... at 100%
1gjdRCSB PDB    PDBbind23aa, >1GJD_1|Chain... at 100%
1o3pRCSB PDB    PDBbind23aa, >1O3P_1|Chain... at 100%
1o5bRCSB PDB    PDBbind23aa, >1O5B_1|Chain... at 100%
1o5cRCSB PDB    PDBbind23aa, >1O5C_1|Chain... at 100%
3ig6RCSB PDB    PDBbind23aa, >3IG6_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1o2gRCSB PDB    PDBbind696
1o3eRCSB PDB    PDBbind696
1o3fRCSB PDB    PDBbind696
1o3gRCSB PDB    PDBbind696
Entry Information
PDB ID1o5a
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein Nameurokinase-type plasminogen activator
Ligand Name696
EC.Number E.C.3.4.21.73
Resolution 1.68(Å)
Affinity (Kd/Ki/IC50)Ki=0.38uM
Release Year2004
Protein/NA SequenceCheck fasta file
Primary Reference J.Mol.Biol. v344 pp. 527-47, 2004
Ligand Properties
Formula C21H18N3O
Molecular Weight 328.387
Exact Mass 328.145
No. of atoms 43
No. of bonds 46
Polar Surface Area 87.63
LOGP Value 5.77      (Computed with XLOGP3)
3.37      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 1
No. of Rotatable Bonds: 4
No. of Nitrogen and Oxygen Atoms: 4
No. of Rings: 4
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P00749  
Entrez Gene IDNCBI Entrez Gene ID: 5328  
ASDInformation of known allosteric effects of PDB entries
 
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