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Related entries of code: 2am1
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2am2RCSB PDB    PDBbind454aa, >2AM2_1|Chain... at 100%
3zm5RCSB PDB    PDBbind465aa, >3ZM5_1|Chain... *
3zm6RCSB PDB    PDBbind465aa, >3ZM6_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID2am1
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Nameudp-n-acetylmuramoylalanine-d-glutamyl-lysine-d
Ligand Name1LG
EC.Number E.C.6.3.2.10
Resolution 2.5(Å)
Affinity (Kd/Ki/IC50)IC50=1uM
Release Year2006
Protein/NA SequenceCheck fasta file
Primary Reference Protein Sci. v14 pp. 3039-47, 2005
Ligand Properties
Formula C20H19Cl2N3O4S2
Molecular Weight 500.419
Exact Mass 499.019
No. of atoms 50
No. of bonds 53
Polar Surface Area 136.12
LOGP Value 4.30      (Computed with XLOGP3)
5.17      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 4
No. of Rotatable Bonds: 5
No. of Nitrogen and Oxygen Atoms: 7
No. of Rings: 4
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q8DNV6  
Entrez Gene IDNCBI Entrez Gene ID: 60234486  
ASDInformation of known allosteric effects of PDB entries

 
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