Browse entries in the PDBbind-CN Database

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Related entries of code: 2b4l
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2b4mRCSB PDB    PDBbind268aa, >2B4M_1|Chains... at 100%
3chgRCSB PDB    PDBbind268aa, >3CHG_1|Chains... at 100%
5nxxRCSB PDB    PDBbind268aa, >5NXX_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1r9lRCSB PDB    PDBbindBET
1sw2RCSB PDB    PDBbindBET
3l6hRCSB PDB    PDBbindBET
3mamRCSB PDB    PDBbindBET
3pppRCSB PDB    PDBbindBET
Entry Information
PDB ID2b4l
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein Nameglycine betaine-binding protein
Ligand NameBET
EC.Number E.C.-.-.-.-
Resolution 2(Å)
Affinity (Kd/Ki/IC50)Kd=17uM
Release Year2006
Protein/NA SequenceCheck fasta file
Primary Reference J.Mol.Biol. v357 pp. 592-606, 2006
Ligand Properties
Formula C5H12NO2
Molecular Weight 118.154
Exact Mass 118.087
No. of atoms 20
No. of bonds 19
Polar Surface Area 37.3
LOGP Value 0.76      (Computed with XLOGP3)
-0.22      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 0
No. of Hydrogen Bond Acceptors: 2
No. of Rotatable Bonds: 1
No. of Nitrogen and Oxygen Atoms: 3
No. of Rings: 0
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P46922  
Entrez Gene IDNCBI Entrez Gene ID: 938354  
ASDInformation of known allosteric effects of PDB entries
 
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