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Related entries of code: 2vcb
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2vc9RCSB PDB    PDBbind891aa, >2VC9_1|Chain... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
2cbjRCSB PDB    PDBbindOAN
2oxnRCSB PDB    PDBbindOAN
2vvsRCSB PDB    PDBbindOAN
3ozpRCSB PDB    PDBbindOAN
3s6tRCSB PDB    PDBbindOAN
3sutRCSB PDB    PDBbindOAN
4az6RCSB PDB    PDBbindOAN
4azbRCSB PDB    PDBbindOAN
4azgRCSB PDB    PDBbindOAN
4aziRCSB PDB    PDBbindOAN
5a6bRCSB PDB    PDBbindOAN
5mi5RCSB PDB    PDBbindOAN
5mi7RCSB PDB    PDBbindOAN
Entry Information
PDB ID2vcb
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameCpGH89
Ligand NameOAN
EC.Number E.C.3.2.1.50
Resolution 2.2(Å)
Affinity (Kd/Ki/IC50)Kd=5.5uM
Release Year2008
Protein/NA SequenceCheck fasta file
Primary Reference (2008) Proc.Natl.Acad.Sci.USA Vol. 105: pp. 6560-6565
Ligand Properties
Formula C15H19N3O7
Molecular Weight 353.327
Exact Mass 353.122
No. of atoms 44
No. of bonds 45
Polar Surface Area 149.71
LOGP Value -0.28      (Computed with XLOGP3)
-0.37      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 5
No. of Hydrogen Bond Acceptors: 5
No. of Rotatable Bonds: 10
No. of Nitrogen and Oxygen Atoms: 10
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): A0A0H2YU91  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
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