Browse entries in the PDBbind-CN Database

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Related entries of code: 2w0x
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1yciRCSB PDB    PDBbind349aa, >1YCI_1|Chain... at 100%
2wa3RCSB PDB    PDBbind349aa, >2WA3_1|Chain... at 100%
2wa4RCSB PDB    PDBbind349aa, >2WA4_1|Chain... at 100%
2yc0RCSB PDB    PDBbind352aa, >2YC0_1|Chain... *
2ydeRCSB PDB    PDBbind352aa, >2YDE_1|Chain... at 100%
4ai8RCSB PDB    PDBbind352aa, >4AI8_1|Chain... at 100%
4bioRCSB PDB    PDBbind352aa, >4BIO_1|Chain... at 100%
5op6RCSB PDB    PDBbind351aa, >5OP6_1|Chain... at 100%
5op8RCSB PDB    PDBbind350aa, >5OP8_1|Chain... at 99%
5opcRCSB PDB    PDBbind350aa, >5OPC_1|Chain... at 99%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
2gklRCSB PDB    PDBbindPD2
2vd7RCSB PDB    PDBbindPD2
2w2iRCSB PDB    PDBbindPD2
4ie0RCSB PDB    PDBbindPD2
4nhyRCSB PDB    PDBbindPD2
4nrqRCSB PDB    PDBbindPD2
5a3wRCSB PDB    PDBbindPD2

Entry Information
PDB ID2w0x
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameHYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR
Ligand NamePD2
EC.Number E.C.1.14.11.16
Resolution 2.12(Å)
Affinity (Kd/Ki/IC50)IC50=625uM
Release Year2009
Protein/NA SequenceCheck fasta file
Primary Reference (2010) Bioorg.Med.Chem.Lett. Vol. 20: pp. 6125-6128
Ligand Properties
Formula C7H5NO4
Molecular Weight 167.119
Exact Mass 167.022
No. of atoms 17
No. of bonds 17
Polar Surface Area 87.49
LOGP Value 2.11      (Computed with XLOGP3)
0.48      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 0
No. of Hydrogen Bond Acceptors: 5
No. of Rotatable Bonds: 0
No. of Nitrogen and Oxygen Atoms: 5
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q9NWT6  
Entrez Gene IDNCBI Entrez Gene ID: 55662  
ASDInformation of known allosteric effects of PDB entries

 
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