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Related entries of code: 2xii
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2wvtRCSB PDB    PDBbind443aa, >2WVT_1|Chains... at 100%
2xibRCSB PDB    PDBbind453aa, >2XIB_1|Chains... at 100%
4j28RCSB PDB    PDBbind450aa, >4J28_1|Chains... at 100%
4jfsRCSB PDB    PDBbind450aa, >4JFS_1|Chains... at 100%
4jftRCSB PDB    PDBbind450aa, >4JFT_1|Chains... at 100%
4jfvRCSB PDB    PDBbind450aa, >4JFV_1|Chains... at 100%
4jfwRCSB PDB    PDBbind450aa, >4JFW_1|Chains... at 100%
4pcsRCSB PDB    PDBbind439aa, >4PCS_1|Chains... at 100%
4pctRCSB PDB    PDBbind439aa, >4PCT_1|Chains... at 100%
4peeRCSB PDB    PDBbind447aa, >4PEE_1|Chains... at 99%
4wsjRCSB PDB    PDBbind445aa, >4WSJ_1|Chains... at 100%
4wskRCSB PDB    PDBbind469aa, >4WSK_1|Chains... at 99%
6hzyRCSB PDB    PDBbind475aa, >6HZY_1|Chains... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID2xii
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameALPHA-L-FUCOSIDASE
Ligand NameTA9
EC.Number E.C.3.2.1.51
Resolution 1.8(Å)
Affinity (Kd/Ki/IC50)Kd=63.3nM
Release Year2010
Protein/NA SequenceCheck fasta file
Primary Reference (2010) Chembiochem Vol. 11: pp. 1971
Ligand Properties
Formula C21H23N2O5
Molecular Weight 383.418
Exact Mass 383.161
No. of atoms 51
No. of bonds 54
Polar Surface Area 123.47
LOGP Value 0.88      (Computed with XLOGP3)
1.00      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 5
No. of Hydrogen Bond Acceptors: 5
No. of Rotatable Bonds: 7
No. of Nitrogen and Oxygen Atoms: 7
No. of Rings: 4
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q8A3I4  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
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