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Related entries of code: 4j28
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2wvtRCSB PDB    PDBbind443aa, >2WVT_1|Chains... at 100%
2xibRCSB PDB    PDBbind453aa, >2XIB_1|Chains... at 100%
2xiiRCSB PDB    PDBbind453aa, >2XII_1|Chains... at 100%
4jfsRCSB PDB    PDBbind450aa, >4JFS_1|Chains... at 100%
4jftRCSB PDB    PDBbind450aa, >4JFT_1|Chains... at 100%
4jfvRCSB PDB    PDBbind450aa, >4JFV_1|Chains... at 100%
4jfwRCSB PDB    PDBbind450aa, >4JFW_1|Chains... at 100%
4pcsRCSB PDB    PDBbind439aa, >4PCS_1|Chains... at 100%
4pctRCSB PDB    PDBbind439aa, >4PCT_1|Chains... at 100%
4peeRCSB PDB    PDBbind447aa, >4PEE_1|Chains... at 99%
4wsjRCSB PDB    PDBbind445aa, >4WSJ_1|Chains... at 100%
4wskRCSB PDB    PDBbind469aa, >4WSK_1|Chains... at 99%
6hzyRCSB PDB    PDBbind475aa, >6HZY_1|Chains... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID4j28
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameAlpha-L-fucosidase
Ligand NameEAT
EC.Number E.C.-.-.-.-
Resolution 1.73(Å)
Affinity (Kd/Ki/IC50)Ki=2.0uM
Release Year2013
Protein/NA SequenceCheck fasta file
Primary Reference (2013) Bioorg.Med.Chem. Vol. 21: pp. 4751-4754
Ligand Properties
Formula C12H16N3O2
Molecular Weight 234.274
Exact Mass 234.124
No. of atoms 33
No. of bonds 35
Polar Surface Area 85.75
LOGP Value -0.10      (Computed with XLOGP3)
0.86      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 4
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 3
No. of Nitrogen and Oxygen Atoms: 5
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q8A3I4  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
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