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Related entries of code: 2xyr
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
3r24RCSB PDB    PDBbind155aa, >3R24_2|Chain... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1aqjRCSB PDB    PDBbindSFG
1qaqRCSB PDB    PDBbindSFG
2h2jRCSB PDB    PDBbindSFG
3cbpRCSB PDB    PDBbindSFG
3lkzRCSB PDB    PDBbindSFG
6bdyRCSB PDB    PDBbindSFG
6ox0RCSB PDB    PDBbindSFG
Entry Information
PDB ID2xyr
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NamePUTATIVE 2'-O-METHYL TRANSFERASE
Ligand NameSFG
EC.Number E.C.2.1.1.-
Resolution 2.5(Å)
Affinity (Kd/Ki/IC50)IC50=0.74uM
Release Year2011
Protein/NA SequenceCheck fasta file
Primary Reference (2011) Plos Pathog. Vol. 7: pp. 2059
Ligand Properties
Formula C15H25N7O5
Molecular Weight 383.403
Exact Mass 383.192
No. of atoms 52
No. of bonds 54
Polar Surface Area 211.89
LOGP Value -4.28      (Computed with XLOGP3)
-2.92      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 5
No. of Hydrogen Bond Acceptors: 7
No. of Rotatable Bonds: 8
No. of Nitrogen and Oxygen Atoms: 12
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P0C6X7  
Entrez Gene IDNCBI Entrez Gene ID: 1489680  
ASDInformation of known allosteric effects of PDB entries
 
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