Browse entries in the PDBbind-CN Database

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Related entries of code: 3e6k
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1wvaRCSB PDB    PDBbind322aa, >1WVA_1|Chains... at 100%
2aebRCSB PDB    PDBbind322aa, >2AEB_1|Chains... at 100%
2pllRCSB PDB    PDBbind322aa, >2PLL_1|Chains... at 100%
3e6vRCSB PDB    PDBbind322aa, >3E6V_1|Chains... at 99%
3f80RCSB PDB    PDBbind322aa, >3F80_1|Chains... at 100%
3kv2RCSB PDB    PDBbind322aa, >3KV2_1|Chains... at 100%
3lp4RCSB PDB    PDBbind322aa, >3LP4_1|Chains... at 100%
3lp7RCSB PDB    PDBbind322aa, >3LP7_1|Chains... at 100%
3mfvRCSB PDB    PDBbind322aa, >3MFV_1|Chains... at 100%
3mfwRCSB PDB    PDBbind322aa, >3MFW_1|Chains... at 100%
3mjlRCSB PDB    PDBbind322aa, >3MJL_1|Chains... at 100%
3sjtRCSB PDB    PDBbind322aa, >3SJT_1|Chains... at 100%
3skkRCSB PDB    PDBbind322aa, >3SKK_1|Chains... at 100%
4fciRCSB PDB    PDBbind322aa, >4FCI_1|Chains... at 100%
4fckRCSB PDB    PDBbind322aa, >4FCK_1|Chains... at 100%
4hwwRCSB PDB    PDBbind314aa, >4HWW_1|Chains... at 100%
4hxqRCSB PDB    PDBbind314aa, >4HXQ_1|Chains... at 100%
6qafRCSB PDB    PDBbind342aa, >6QAF_1|Chains... at 100%
6q92RCSB PDB    PDBbind342aa, >6Q92_1|Chains... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1d3vRCSB PDB    PDBbindABH
2aebRCSB PDB    PDBbindABH
2pllRCSB PDB    PDBbindABH
3e6vRCSB PDB    PDBbindABH
3mmrRCSB PDB    PDBbindABH
4iu0RCSB PDB    PDBbindABH
4q3qRCSB PDB    PDBbindABH
6q92RCSB PDB    PDBbindABH
Entry Information
PDB ID3e6k
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameArginase-1(D183A)
Ligand NameABH
EC.Number E.C.3.5.3.1
Resolution 2.1(Å)
Affinity (Kd/Ki/IC50)Kd=7uM
Release Year2008
Protein/NA SequenceCheck fasta file
Primary Reference (2009) Biochemistry Vol. 48: pp. 121-131
Ligand Properties
Formula C6H18BNO5
Molecular Weight 195.022
Exact Mass 195.128
No. of atoms 31
No. of bonds 30
Polar Surface Area 103.63
LOGP Value -2.59      (Computed with XLOGP3)
-2.77      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 4
No. of Hydrogen Bond Acceptors: 5
No. of Rotatable Bonds: 6
No. of Nitrogen and Oxygen Atoms: 6
No. of Rings: 0
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P05089  
Entrez Gene IDNCBI Entrez Gene ID: 383  
ASDInformation of known allosteric effects of PDB entries
 
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