Browse entries in the PDBbind-CN Database

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Related entries of code: 3e9b
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1d3vRCSB PDB    PDBbind323aa, >1D3V_1|Chains... *
1hq5RCSB PDB    PDBbind323aa, >1HQ5_1|Chains... at 100%
1hqfRCSB PDB    PDBbind323aa, >1HQF_1|Chains... at 100%
1hqgRCSB PDB    PDBbind323aa, >1HQG_1|Chains... at 99%
1hqhRCSB PDB    PDBbind323aa, >1HQH_1|Chains... at 100%
1t4sRCSB PDB    PDBbind314aa, >1T4S_1|Chains... at 100%
1t5fRCSB PDB    PDBbind314aa, >1T5F_1|Chains... at 98%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1hq5RCSB PDB    PDBbindS2C
1pq3RCSB PDB    PDBbindS2C
1wvaRCSB PDB    PDBbindS2C
4iu4RCSB PDB    PDBbindS2C
Entry Information
PDB ID3e9b
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameArginase-1(T135A)
Ligand NameS2C
EC.Number E.C.3.5.3.1
Resolution 2.15(Å)
Affinity (Kd/Ki/IC50)Ki=4.5uM
Release Year2008
Protein/NA SequenceCheck fasta file
Primary Reference (2009) Biochemistry Vol. 48: pp. 121-131
Ligand Properties
Formula C5H16BNO5S
Molecular Weight 213.060
Exact Mass 213.084
No. of atoms 29
No. of bonds 28
Polar Surface Area 128.93
LOGP Value -3.01      (Computed with XLOGP3)
-3.20      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 4
No. of Hydrogen Bond Acceptors: 5
No. of Rotatable Bonds: 6
No. of Nitrogen and Oxygen Atoms: 6
No. of Rings: 0
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P07824  
Entrez Gene IDNCBI Entrez Gene ID: 29221  
ASDInformation of known allosteric effects of PDB entries
 
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