Browse entries in the PDBbind-CN Database

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Related entries of code: 1t4s
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1d3vRCSB PDB    PDBbind323aa, >1D3V_1|Chains... *
1hq5RCSB PDB    PDBbind323aa, >1HQ5_1|Chains... at 100%
1hqfRCSB PDB    PDBbind323aa, >1HQF_1|Chains... at 100%
1hqgRCSB PDB    PDBbind323aa, >1HQG_1|Chains... at 99%
1hqhRCSB PDB    PDBbind323aa, >1HQH_1|Chains... at 100%
1t5fRCSB PDB    PDBbind314aa, >1T5F_1|Chains... at 98%
3e9bRCSB PDB    PDBbind323aa, >3E9B_1|Chains... at 99%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
5ypyRCSB PDB    PDBbindVAL
5ypwRCSB PDB    PDBbindVAL
5yppRCSB PDB    PDBbindVAL
Entry Information
PDB ID1t4s
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Namearginase 1
Ligand NameVAL
EC.Number E.C.3.5.3.1
Resolution 2.8(Å)
Affinity (Kd/Ki/IC50)Ki=3.6mM
Release Year2004
Protein/NA SequenceCheck fasta file
Primary Reference Biochemistry v43 pp. 8987-99, 2004
Ligand Properties
Formula C5H12NO2
Molecular Weight 118.154
Exact Mass 118.087
No. of atoms 20
No. of bonds 19
Polar Surface Area 64.94
LOGP Value -1.15      (Computed with XLOGP3)
-0.66      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 2
No. of Rotatable Bonds: 1
No. of Nitrogen and Oxygen Atoms: 3
No. of Rings: 0
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P07824  
Entrez Gene IDNCBI Entrez Gene ID: 29221  
ASDInformation of known allosteric effects of PDB entries
 
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