Browse entries in the PDBbind-CN Database

Display Options: Structure:  




Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

           
Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 3kqr
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2a3wRCSB PDB    PDBbind204aa, >2A3W_1|Chains... *
2a3xRCSB PDB    PDBbind204aa, >2A3X_1|Chains... at 100%
2w08RCSB PDB    PDBbind204aa, >2W08_1|Chains... at 100%
4avsRCSB PDB    PDBbind204aa, >4AVS_1|Chains... at 100%
4avtRCSB PDB    PDBbind204aa, >4AVT_1|Chains... at 100%
4ayuRCSB PDB    PDBbind204aa, >4AYU_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
3l2yRCSB PDB    PDBbindOPE

Entry Information
PDB ID3kqr
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameSerum amyloid P-component,SAP
Ligand NameOPE
EC.Number E.C.-.-.-.-
Resolution 1.5(Å)
Affinity (Kd/Ki/IC50)Kd=36.8uM
Release Year2010
Protein/NA SequenceCheck fasta file
Primary Reference (2011) J.Mol.Recognit. Vol. 24: pp. 371-377
Ligand Properties
Formula C2H10NO4P
Molecular Weight 143.079
Exact Mass 143.035
No. of atoms 18
No. of bonds 17
Polar Surface Area 111.15
LOGP Value -4.94      (Computed with XLOGP3)
-2.10      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 2
No. of Nitrogen and Oxygen Atoms: 5
No. of Rings: 0
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P02743  
Entrez Gene IDNCBI Entrez Gene ID: 325  
ASDInformation of known allosteric effects of PDB entries

 
This site has been visited times since Nov 2007.


Copyright ©2007-2024    涓婃捣鐩堣禌鎬濅俊鎭鎶鏈夐檺鍏徃    缃戠珯澶囨鍙凤細娌狪CP澶2021015625鍙-3    娌叕缃戝畨澶囷細姝e湪鐢宠涓


Technical Support锛堟妧鏈敮鎸侊級: yingsaisi@foxmail.com