Browse entries in the PDBbind-CN Database

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Related entries of code: 3od0
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
3ocpRCSB PDB    PDBbind139aa, >3OCP_1|Chains... at 97%
4z07RCSB PDB    PDBbind262aa, >4Z07_1|Chains... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
4muvRCSB PDB    PDBbindPCG
4z07RCSB PDB    PDBbindPCG
5h5oRCSB PDB    PDBbindPCG
6hq7RCSB PDB    PDBbindPCG
Entry Information
PDB ID3od0
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NamePRKG1 protein
Ligand NamePCG
EC.Number E.C.2.7.11.12
Resolution 2.9(Å)
Affinity (Kd/Ki/IC50)Kd=12nM
Release Year2011
Protein/NA SequenceCheck fasta file
Primary Reference (2011) Plos One Vol. 6: pp. e18413-e18413
Ligand Properties
Formula C10H14N5O7P
Molecular Weight 347.221
Exact Mass 347.063
No. of atoms 37
No. of bonds 40
Polar Surface Area 192.81
LOGP Value -2.18      (Computed with XLOGP3)
-1.96      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 5
No. of Rotatable Bonds: 2
No. of Nitrogen and Oxygen Atoms: 12
No. of Rings: 4
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q13976  
Entrez Gene IDNCBI Entrez Gene ID: 5592  
ASDInformation of known allosteric effects of PDB entries
 
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