Browse entries in the PDBbind-CN Database

Display Options: Structure:  




Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

           
Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 3pm1
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1qvtRCSB PDB    PDBbind194aa, >1QVT_1|Chains... at 99%
1qvuRCSB PDB    PDBbind194aa, >1QVU_1|Chains... at 99%
3bt9RCSB PDB    PDBbind188aa, >3BT9_1|Chains... at 99%
3btcRCSB PDB    PDBbind188aa, >3BTC_1|Chains... at 99%
3btiRCSB PDB    PDBbind188aa, >3BTI_1|Chains... at 99%
3btjRCSB PDB    PDBbind188aa, >3BTJ_1|Chains... at 99%
3btlRCSB PDB    PDBbind188aa, >3BTL_1|Chains... at 99%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
3v78RCSB PDB    PDBbindET
3vvyRCSB PDB    PDBbindET
5er5RCSB PDB    PDBbindET
5kcbRCSB PDB    PDBbindET
Entry Information
PDB ID3pm1
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameHTH-type transcriptional regulator qacR, QacR E90Q
Ligand NameET
EC.Number E.C.-.-.-.-
Resolution 2.8(Å)
Affinity (Kd/Ki/IC50)Kd=1.18uM
Release Year2011
Protein/NA SequenceCheck fasta file
Primary Reference (2011) Plos One Vol. 6: pp. e15974-e15974
Ligand Properties
Formula C21H21N3
Molecular Weight 315.412
Exact Mass 315.174
No. of atoms 45
No. of bonds 48
Polar Surface Area 55.28
LOGP Value 3.94      (Computed with XLOGP3)
5.67      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 0
No. of Rotatable Bonds: 2
No. of Nitrogen and Oxygen Atoms: 3
No. of Rings: 4
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P0A0N3  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
This site has been visited times since Nov 2007.


Copyright ©2007-2024    涓婃捣鐩堣禌鎬濅俊鎭鎶鏈夐檺鍏徃    缃戠珯澶囨鍙凤細娌狪CP澶2021015625鍙-3    娌叕缃戝畨澶囷細姝ｅ湪鐢宠涓


Technical Support锛堟妧鏈敮鎸侊級: yingsaisi@foxmail.com