Browse entries in the PDBbind-CN Database

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Related entries of code: 3qx8
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
3qx9RCSB PDB    PDBbind138aa, >3QX9_1|Chains... at 99%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
3hxiRCSB PDB    PDBbindGTG
5tefRCSB PDB    PDBbindGTG

Entry Information
PDB ID3qx8
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameMID domain from Protein argonaute-2
Ligand NameGTG
EC.Number E.C.-.-.-.-
Resolution 2.3(Å)
Affinity (Kd/Ki/IC50)Kd=1.37mM
Release Year2011
Protein/NA SequenceCheck fasta file
Primary Reference (2011) Embo Rep. Vol. 12: pp. 415-420
Ligand Properties
Formula C21H35N10O18P3
Molecular Weight 808.480
Exact Mass 808.134
No. of atoms 87
No. of bonds 92
Polar Surface Area 472.17
LOGP Value -6.40      (Computed with XLOGP3)
-5.07      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 4
No. of Hydrogen Bond Acceptors: 13
No. of Rotatable Bonds: 16
No. of Nitrogen and Oxygen Atoms: 28
No. of Rings: 6
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q9UKV8  
Entrez Gene IDNCBI Entrez Gene ID: 27161  
ASDInformation of known allosteric effects of PDB entries

 
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