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Related entries of code: 4ci1
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
4ci2RCSB PDB    PDBbind469aa, >4CI2_2|Chain... at 100%
4ci3RCSB PDB    PDBbind469aa, >4CI3_2|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID4ci1
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Namehuman DDB1 and CRBN E3 ubiquitin ligase complex
Ligand NameEF2
EC.Number E.C.-.-.-.-
Resolution 2.98(Å)
Affinity (Kd/Ki/IC50)Kd=249.2nM
Release Year2014
Protein/NA SequenceCheck fasta file
Primary Reference (2014) Nature Vol. 512: pp. 49-54
Ligand Properties
Formula C13H10N2O4
Molecular Weight 258.229
Exact Mass 258.064
No. of atoms 29
No. of bonds 31
Polar Surface Area 83.55
LOGP Value 0.13      (Computed with XLOGP3)
0.35      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 4
No. of Rotatable Bonds: 1
No. of Nitrogen and Oxygen Atoms: 6
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P0CF65  Q16531  
Entrez Gene IDNCBI Entrez Gene ID: 1642  
ASDInformation of known allosteric effects of PDB entries

 
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