Browse entries in the PDBbind-CN Database

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Related entries of code: 4dfw
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1q4kRCSB PDB    PDBbind259aa, >1Q4K_1|Chains... *
1umwRCSB PDB    PDBbind237aa, >1UMW_1|Chains... at 100%
3bziRCSB PDB    PDBbind239aa, >3BZI_1|Chain... at 100%
3fvhRCSB PDB    PDBbind237aa, >3FVH_1|Chain... at 98%
3hikRCSB PDB    PDBbind237aa, >3HIK_1|Chain... at 100%
3rq7RCSB PDB    PDBbind237aa, >3RQ7_1|Chain... at 98%
4e67RCSB PDB    PDBbind232aa, >4E67_1|Chain... at 96%
4e9dRCSB PDB    PDBbind232aa, >4E9D_1|Chain... at 96%
4h71RCSB PDB    PDBbind240aa, >4H71_1|Chains... at 98%
4hcoRCSB PDB    PDBbind240aa, >4HCO_1|Chains... at 98%
4lklRCSB PDB    PDBbind222aa, >4LKL_1|Chain... at 100%
4lkmRCSB PDB    PDBbind231aa, >4LKM_1|Chains... at 100%
4o6wRCSB PDB    PDBbind237aa, >4O6W_1|Chain... at 98%
4o9wRCSB PDB    PDBbind222aa, >4O9W_1|Chain... at 100%
4rcpRCSB PDB    PDBbind228aa, >4RCP_1|Chain... at 100%
4whhRCSB PDB    PDBbind237aa, >4WHH_1|Chain... at 98%
4whlRCSB PDB    PDBbind237aa, >4WHL_1|Chain... at 98%
4x9rRCSB PDB    PDBbind237aa, >4X9R_1|Chain... at 98%
4x9vRCSB PDB    PDBbind237aa, >4X9V_1|Chain... at 98%
4x9wRCSB PDB    PDBbind237aa, >4X9W_1|Chain... at 98%
5dmsRCSB PDB    PDBbind237aa, >5DMS_1|Chains... at 95%
6ax4RCSB PDB    PDBbind237aa, >6AX4_1|Chain... at 98%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1bm2RCSB PDB    PDBbind7-mer
1bzhRCSB PDB    PDBbind7-mer
1ekbRCSB PDB    PDBbind7-mer
1evhRCSB PDB    PDBbind7-mer
1f8aRCSB PDB    PDBbind7-mer
1fhrRCSB PDB    PDBbind7-mer
1fknRCSB PDB    PDBbind7-mer
1j4kRCSB PDB    PDBbind7-mer
1jojRCSB PDB    PDBbind7-mer
1m4hRCSB PDB    PDBbind7-mer
1n7tRCSB PDB    PDBbind7-mer
1nltRCSB PDB    PDBbind7-mer
1oh4RCSB PDB    PDBbind7-mer
1okwRCSB PDB    PDBbind7-mer
1pipRCSB PDB    PDBbind7-mer
1py1RCSB PDB    PDBbind7-mer
1q5lRCSB PDB    PDBbind7-mer
1qscRCSB PDB    PDBbind7-mer
1rzxRCSB PDB    PDBbind7-mer
1slgRCSB PDB    PDBbind7-mer
1stsRCSB PDB    PDBbind7-mer
1tzeRCSB PDB    PDBbind7-mer
1umwRCSB PDB    PDBbind7-mer
1vwnRCSB PDB    PDBbind7-mer
2er6RCSB PDB    PDBbind7-mer
2joaRCSB PDB    PDBbind7-mer
2l7uRCSB PDB    PDBbind7-mer
2mipRCSB PDB    PDBbind7-mer
2nmbRCSB PDB    PDBbind7-mer
2pemRCSB PDB    PDBbind7-mer
2pv1RCSB PDB    PDBbind7-mer
2q3zRCSB PDB    PDBbind7-mer
2w6uRCSB PDB    PDBbind7-mer
2w78RCSB PDB    PDBbind7-mer
2xqqRCSB PDB    PDBbind7-mer
2zlfRCSB PDB    PDBbind7-mer
3ddaRCSB PDB    PDBbind7-mer
3ddbRCSB PDB    PDBbind7-mer
3fvhRCSB PDB    PDBbind7-mer
3iflRCSB PDB    PDBbind7-mer
3ifoRCSB PDB    PDBbind7-mer
3ifpRCSB PDB    PDBbind7-mer
3l81RCSB PDB    PDBbind7-mer
3nziRCSB PDB    PDBbind7-mer
3oleRCSB PDB    PDBbind7-mer
3olgRCSB PDB    PDBbind7-mer
3oliRCSB PDB    PDBbind7-mer
3rq7RCSB PDB    PDBbind7-mer
3rulRCSB PDB    PDBbind7-mer
3rumRCSB PDB    PDBbind7-mer
3runRCSB PDB    PDBbind7-mer
3stjRCSB PDB    PDBbind7-mer
3t6rRCSB PDB    PDBbind7-mer
3upvRCSB PDB    PDBbind7-mer
3uqrRCSB PDB    PDBbind7-mer
3vb6RCSB PDB    PDBbind7-mer
3vfjRCSB PDB    PDBbind7-mer
3wdcRCSB PDB    PDBbind7-mer
3wddRCSB PDB    PDBbind7-mer
3wdeRCSB PDB    PDBbind7-mer
4aifRCSB PDB    PDBbind7-mer
4dvfRCSB PDB    PDBbind7-mer
4eqfRCSB PDB    PDBbind7-mer
4ezwRCSB PDB    PDBbind7-mer
4ezxRCSB PDB    PDBbind7-mer
4ezyRCSB PDB    PDBbind7-mer
4ezzRCSB PDB    PDBbind7-mer
4fbxRCSB PDB    PDBbind7-mer
4fgxRCSB PDB    PDBbind7-mer
4gneRCSB PDB    PDBbind7-mer
4gplRCSB PDB    PDBbind7-mer
4igkRCSB PDB    PDBbind7-mer
4j73RCSB PDB    PDBbind7-mer
4lp9RCSB PDB    PDBbind7-mer
4mn3RCSB PDB    PDBbind7-mer
4o6wRCSB PDB    PDBbind7-mer
4onfRCSB PDB    PDBbind7-mer
4tkyRCSB PDB    PDBbind7-mer
4u0gRCSB PDB    PDBbind7-mer
6isoRCSB PDB    PDBbind7-mer
4x3iRCSB PDB    PDBbind7-mer
4x3kRCSB PDB    PDBbind7-mer
4y32RCSB PDB    PDBbind7-mer
4y3bRCSB PDB    PDBbind7-mer
5cs2RCSB PDB    PDBbind7-mer
5hjdRCSB PDB    PDBbind7-mer
5j5xRCSB PDB    PDBbind7-mer
5lynRCSB PDB    PDBbind7-mer
5m63RCSB PDB    PDBbind7-mer
5n7gRCSB PDB    PDBbind7-mer
5ovcRCSB PDB    PDBbind7-mer
5ovpRCSB PDB    PDBbind7-mer
5ovvRCSB PDB    PDBbind7-mer
5oydRCSB PDB    PDBbind7-mer
5w38RCSB PDB    PDBbind7-mer
5wxgRCSB PDB    PDBbind7-mer
5wxhRCSB PDB    PDBbind7-mer
5xo2RCSB PDB    PDBbind7-mer
5xofRCSB PDB    PDBbind7-mer
5y20RCSB PDB    PDBbind7-mer
5yyfRCSB PDB    PDBbind7-mer
6b67RCSB PDB    PDBbind7-mer
6cenRCSB PDB    PDBbind7-mer
6do3RCSB PDB    PDBbind7-mer
6exjRCSB PDB    PDBbind7-mer
6mnfRCSB PDB    PDBbind7-mer
7kmeRCSB PDB    PDBbind7-mer
8hvpRCSB PDB    PDBbind7-mer
6pkaRCSB PDB    PDBbind7-mer
6p3wRCSB PDB    PDBbind7-mer
6oxlRCSB PDB    PDBbind7-mer
6om4RCSB PDB    PDBbind7-mer
6n3eRCSB PDB    PDBbind7-mer
6mqmRCSB PDB    PDBbind7-mer
6hldRCSB PDB    PDBbind7-mer
6gf3RCSB PDB    PDBbind7-mer
6frjRCSB PDB    PDBbind7-mer
6cn8RCSB PDB    PDBbind7-mer
5n7bRCSB PDB    PDBbind7-mer
6dn5RCSB PDB    PDBbind7-mer
Entry Information
PDB ID4dfw
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameSerine/threonine-protein kinase PLK1
Ligand Name7-mer
EC.Number E.C.2.7.11.21
Resolution 1.55(Å)
Affinity (Kd/Ki/IC50)IC50=14nM
Release Year2012
Protein/NA SequenceCheck fasta file
Primary Reference (2012) Chem.Biol. Vol. 7: pp. 805-810
Ligand Properties
Formula C36H56N8O12P
Molecular Weight 823.850
Exact Mass 823.376
No. of atoms 113
No. of bonds 115
Polar Surface Area 321.45
LOGP Value -1.43      (Computed with XLOGP3)
0.71      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 7
No. of Hydrogen Bond Acceptors: 11
No. of Rotatable Bonds: 28
No. of Nitrogen and Oxygen Atoms: 20
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P53350  
Entrez Gene IDNCBI Entrez Gene ID: 5347  
ASDInformation of known allosteric effects of PDB entries
 
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