Browse entries in the PDBbind-CN Database

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Related entries of code: 4ibc
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
3l25RCSB PDB    PDBbind129aa, >3L25_1|Chains... *
4ibbRCSB PDB    PDBbind129aa, >4IBB_1|Chains... at 100%
4ibdRCSB PDB    PDBbind129aa, >4IBD_1|Chains... at 100%
4ibeRCSB PDB    PDBbind129aa, >4IBE_1|Chains... at 100%
4ibfRCSB PDB    PDBbind129aa, >4IBF_1|Chains... at 100%
4ibgRCSB PDB    PDBbind129aa, >4IBG_1|Chains... at 100%
4ibiRCSB PDB    PDBbind129aa, >4IBI_1|Chains... at 100%
4ibjRCSB PDB    PDBbind129aa, >4IBJ_1|Chains... at 100%
4ibkRCSB PDB    PDBbind129aa, >4IBK_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID4ibc
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NamePolymerase cofactor Ebola virus VP35
Ligand Name12G
EC.Number E.C.-.-.-.-
Resolution 1.75(Å)
Affinity (Kd/Ki/IC50)Kd=1049uM
Release Year2014
Protein/NA SequenceCheck fasta file
Primary Reference (2014) J.Mol.Biol. Vol. 426: pp. 2045-2058
Ligand Properties
Formula C25H17Cl2NO5
Molecular Weight 482.312
Exact Mass 481.048
No. of atoms 50
No. of bonds 53
Polar Surface Area 94.91
LOGP Value 6.71      (Computed with XLOGP3)
5.47      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 5
No. of Rotatable Bonds: 6
No. of Nitrogen and Oxygen Atoms: 6
No. of Rings: 4
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q05127  
Entrez Gene IDNCBI Entrez Gene ID: 911827  
ASDInformation of known allosteric effects of PDB entries

 
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