Browse entries in the PDBbind-CN Database

Display Options: Structure:  




Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

           
Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 4kva
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
4kv9RCSB PDB    PDBbind412aa, >4KV9_1|Chains... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1jlrRCSB PDB    PDBbindGTP
2j7wRCSB PDB    PDBbindGTP
2xtnRCSB PDB    PDBbindGTP
3evcRCSB PDB    PDBbindGTP
3evdRCSB PDB    PDBbindGTP
3ffuRCSB PDB    PDBbindGTP
3rsbRCSB PDB    PDBbindGTP
4kaxRCSB PDB    PDBbindGTP
4ncnRCSB PDB    PDBbindGTP
5efcRCSB PDB    PDBbindGTP
5ey0RCSB PDB    PDBbindGTP
5gofRCSB PDB    PDBbindGTP
6j72RCSB PDB    PDBbindGTP
6iaeRCSB PDB    PDBbindGTP
6ia7RCSB PDB    PDBbindGTP
6ak5RCSB PDB    PDBbindGTP
6sgeRCSB PDB    PDBbindGTP
Entry Information
PDB ID4kva
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameGTPase domain of Septin 10 from Schistosoma mansoni
Ligand NameGTP
EC.Number E.C.-.-.-.-
Resolution 2.14(Å)
Affinity (Kd/Ki/IC50)Kd=115uM
Release Year2014
Protein/NA SequenceCheck fasta file
Primary Reference (2014) J.Biol.Chem. Vol. 289: pp. 7799-7811
Ligand Properties
Formula C10H20N5O14P3
Molecular Weight 527.212
Exact Mass 527.022
No. of atoms 52
No. of bonds 54
Polar Surface Area 350.6
LOGP Value -5.61      (Computed with XLOGP3)
-3.65      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 11
No. of Rotatable Bonds: 9
No. of Nitrogen and Oxygen Atoms: 19
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): G4VFI8  
Entrez Gene IDNCBI Entrez Gene ID: 8347800  
ASDInformation of known allosteric effects of PDB entries
 
This site has been visited times since Nov 2007.


Copyright ©2007-2024    涓婃捣鐩堣禌鎬濅俊鎭鎶鏈夐檺鍏徃    缃戠珯澶囨鍙凤細娌狪CP澶2021015625鍙-3    娌叕缃戝畨澶囷細姝ｅ湪鐢宠涓


Technical Support锛堟妧鏈敮鎸侊級: yingsaisi@foxmail.com