Browse entries in the PDBbind-CN Database

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Related entries of code: 4np3
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
4mrdRCSB PDB    PDBbind149aa, >4MRD_1|Chain... at 100%
4mreRCSB PDB    PDBbind150aa, >4MRE_1|Chain... *
4mrfRCSB PDB    PDBbind150aa, >4MRF_1|Chain... at 100%
4mrgRCSB PDB    PDBbind150aa, >4MRG_1|Chain... at 100%
4mrhRCSB PDB    PDBbind150aa, >4MRH_1|Chain... at 100%
4np2RCSB PDB    PDBbind150aa, >4NP2_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID4np3
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein Namemurine cd44 hyaluronan binding domain
Ligand Name2L2
EC.Number E.C.-.-.-.-
Resolution 1.61(Å)
Affinity (Kd/Ki/IC50)Kd=0.5mM
Release Year2014
Protein/NA SequenceCheck fasta file
Primary Reference (2014) J.Med.Chem. Vol. 57: pp. 2714-2725
Ligand Properties
Formula C14H19N4
Molecular Weight 243.327
Exact Mass 243.161
No. of atoms 37
No. of bonds 39
Polar Surface Area 59.14
LOGP Value 1.18      (Computed with XLOGP3)
2.59      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 3
No. of Hydrogen Bond Acceptors: 1
No. of Rotatable Bonds: 2
No. of Nitrogen and Oxygen Atoms: 4
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P15379  
Entrez Gene IDNCBI Entrez Gene ID: 12505  
ASDInformation of known allosteric effects of PDB entries

 
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